Gene Ccur_08200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08200 
Symbol 
ID8375028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp935136 
End bp935909 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID644993743 
Productsmall-conductance mechanosensitive channel 
Protein accessionYP_003151206 
Protein GI256827247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value0.335106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATG CTCTCAGTGG ATTCATTCAG AATTATGCGC TGGCTGTTTC GGTGCTTGCT 
GCTATTGTCA TTATTGTTGT TACTTATATC GTCCAACGAT GGGTGTTTTC GCTGATCAAA
CGGTTATCAA ACAGCGATAA AACCCCTCTA CCGGGTGGAT CCATTCTGGC AAACATCGCT
CGCATCATCA TTTGGTTGCT GGGTTTAGCC ATTCTTTCAA AGGTTTGTTT CAACTACGAT
CTCACGGCAT TTGTTACGGC GTTAGGTGTT GGCGGTATTG CGATCTCGCT TGGTTTTCAA
GATACTTTGC TCAACCTTAT TGGCGGATTG CAGGTCTCGC TTGGTAAGAT CGTTGAACTC
GGGGAATACA TCGAGGTACT TGGTCAACGC GGGCGGGTTG TCGATATTGG TTGGCGCCAT
ACGACGATCA TTGATTCATC CGGCAGCCTT CATTCCATAC CGAATTCACT CATGAACAAA
AACGCCATTG CCAGTATCGG TGAAGAAGGG GTTGTGAGCG TTCCTTTTCT TTTAGCTATA
GGAAGTGATC TTGATGCGTT TAGTAACCGA GCCGTTGAAG CAGCGCGTCA TGCACTCGGT
CATGCAATAG GCGATAAGGG TGTATCGGTC CTTATGCGCG GGGAAGAAGT GGGTGGATTA
GCTGGCGATA TAACGGTGCA CTATAAGCGT TCGCGGATTA CTTCATCTGA TGCAGCCGAT
AAGGTACTGC GTGCCATTGC TCCCGTGCTT ACCGAGTATG CCGATGAGAG TTAG
 
Protein sequence
MSDALSGFIQ NYALAVSVLA AIVIIVVTYI VQRWVFSLIK RLSNSDKTPL PGGSILANIA 
RIIIWLLGLA ILSKVCFNYD LTAFVTALGV GGIAISLGFQ DTLLNLIGGL QVSLGKIVEL
GEYIEVLGQR GRVVDIGWRH TTIIDSSGSL HSIPNSLMNK NAIASIGEEG VVSVPFLLAI
GSDLDAFSNR AVEAARHALG HAIGDKGVSV LMRGEEVGGL AGDITVHYKR SRITSSDAAD
KVLRAIAPVL TEYADES