Gene Ccur_06230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_06230 
Symbol 
ID8374831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp729520 
End bp730719 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content53% 
IMG OID644993546 
Productribonuclease D 
Protein accessionYP_003151021 
Protein GI256827062 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000184069 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value0.0058155 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCGATA CTATCATCAA AACCGACCTA TCGAGACTTG AAGGATTTCA TAGCGTGTTC 
ATTACCGACC AAGCTGAGCT CGAAGCATTT GCTAAGCGTG CTCTTGACTC ATCTGTGCTG
GCCATCGACA CCGAGTTTCT TCGCGAAAAG ACCTACTACG CGCGCTTGTG TTTACTCCAA
ATGCAGACCG ATGATGAAAC CATTATTGTC GATCCTTTTG CGGTGTCAGA TTTAGGTGTG
CTTGCTCCGC TCTTTCAGTC GTCGAGCATC ATGAAGATCG TGCACTCCGG CCGGCAAGAT
CTGGAGATAC TCAATCGTGA AGTCGGTCTT TTGCCACAGC CACTCTTTGA CACGCAAGTT
GCTGCAGCGC TGTTGGGCCA CACCCAGCAA ATAGGGTATG GCAGTCTCGT TTCAGCTGTT
TGTGGTGTGC AGCTTGCTAA GATGGATTCC TTCACCGATT GGTCGCGGCG CCCTCTTTCT
GCTTCTCAAA TCTCATATGC CGCTGATGAC GTGATATATC TGCCTCAGCT ATACCATACG
ATGACCGATG AGCTTGAACG GTTGGGTCGT ATTCACTGGC TTGATCCTGA TTTTGCTGCG
CTCATTGACC CAGCGCTGTA CGTTGATGAC CCACGCGATC GCTATCGTCG CCTTAAGCGA
GTGGGTCAGC TCAGCCGGCG CCAGCTTTCT GCTGCACGCG AAGTAGCAGC TTGGCGTGAA
AAGCGCGCGC GCGACCGGGA TATACCGCGT AAATGGGTGA TGACCGACGA ACAGGTGGTT
GAGGCGTGCA AACGCGAAGC GCGAACGATC GATAGTCTGT TCATGGTGCG GGGTCTTTCG
GATCGTCTTT CAACCGGGGA TGCTCGTACG GTGGTGCGCT GTATCTGCCG CGGTCTCGAC
CTTGAACCCG ATAAATGGCC GAAAAGCGAT CATGTTGCCT ATGGGGGCGA TGTAAACGTC
GATGCGGTTC TCGATGCGAT GACAGCACTT GTACGCTTGC GTGCCCGCCA GAATAATATT
GCGTTCCAGA CATTGGCGAG CCATTCTGAT TTGGTAAAGG TTGCGCATGG CCACAAGGAT
GCCGAAATCT TGCGCGGGTG GCGTCGTGAA ATTGTTGGTG CGGAATTACT GGAGCTTTTA
GCTGGTCGTA TAAGCCTGAG TGTACAAGAA GGTGCCCTCA AGGTAACGAA ACATCCATAG
 
Protein sequence
MVDTIIKTDL SRLEGFHSVF ITDQAELEAF AKRALDSSVL AIDTEFLREK TYYARLCLLQ 
MQTDDETIIV DPFAVSDLGV LAPLFQSSSI MKIVHSGRQD LEILNREVGL LPQPLFDTQV
AAALLGHTQQ IGYGSLVSAV CGVQLAKMDS FTDWSRRPLS ASQISYAADD VIYLPQLYHT
MTDELERLGR IHWLDPDFAA LIDPALYVDD PRDRYRRLKR VGQLSRRQLS AAREVAAWRE
KRARDRDIPR KWVMTDEQVV EACKREARTI DSLFMVRGLS DRLSTGDART VVRCICRGLD
LEPDKWPKSD HVAYGGDVNV DAVLDAMTAL VRLRARQNNI AFQTLASHSD LVKVAHGHKD
AEILRGWRRE IVGAELLELL AGRISLSVQE GALKVTKHP