Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_06230 |
Symbol | |
ID | 8374831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 729520 |
End bp | 730719 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644993546 |
Product | ribonuclease D |
Protein accession | YP_003151021 |
Protein GI | 256827062 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000184069 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 0.0058155 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCGATA CTATCATCAA AACCGACCTA TCGAGACTTG AAGGATTTCA TAGCGTGTTC ATTACCGACC AAGCTGAGCT CGAAGCATTT GCTAAGCGTG CTCTTGACTC ATCTGTGCTG GCCATCGACA CCGAGTTTCT TCGCGAAAAG ACCTACTACG CGCGCTTGTG TTTACTCCAA ATGCAGACCG ATGATGAAAC CATTATTGTC GATCCTTTTG CGGTGTCAGA TTTAGGTGTG CTTGCTCCGC TCTTTCAGTC GTCGAGCATC ATGAAGATCG TGCACTCCGG CCGGCAAGAT CTGGAGATAC TCAATCGTGA AGTCGGTCTT TTGCCACAGC CACTCTTTGA CACGCAAGTT GCTGCAGCGC TGTTGGGCCA CACCCAGCAA ATAGGGTATG GCAGTCTCGT TTCAGCTGTT TGTGGTGTGC AGCTTGCTAA GATGGATTCC TTCACCGATT GGTCGCGGCG CCCTCTTTCT GCTTCTCAAA TCTCATATGC CGCTGATGAC GTGATATATC TGCCTCAGCT ATACCATACG ATGACCGATG AGCTTGAACG GTTGGGTCGT ATTCACTGGC TTGATCCTGA TTTTGCTGCG CTCATTGACC CAGCGCTGTA CGTTGATGAC CCACGCGATC GCTATCGTCG CCTTAAGCGA GTGGGTCAGC TCAGCCGGCG CCAGCTTTCT GCTGCACGCG AAGTAGCAGC TTGGCGTGAA AAGCGCGCGC GCGACCGGGA TATACCGCGT AAATGGGTGA TGACCGACGA ACAGGTGGTT GAGGCGTGCA AACGCGAAGC GCGAACGATC GATAGTCTGT TCATGGTGCG GGGTCTTTCG GATCGTCTTT CAACCGGGGA TGCTCGTACG GTGGTGCGCT GTATCTGCCG CGGTCTCGAC CTTGAACCCG ATAAATGGCC GAAAAGCGAT CATGTTGCCT ATGGGGGCGA TGTAAACGTC GATGCGGTTC TCGATGCGAT GACAGCACTT GTACGCTTGC GTGCCCGCCA GAATAATATT GCGTTCCAGA CATTGGCGAG CCATTCTGAT TTGGTAAAGG TTGCGCATGG CCACAAGGAT GCCGAAATCT TGCGCGGGTG GCGTCGTGAA ATTGTTGGTG CGGAATTACT GGAGCTTTTA GCTGGTCGTA TAAGCCTGAG TGTACAAGAA GGTGCCCTCA AGGTAACGAA ACATCCATAG
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Protein sequence | MVDTIIKTDL SRLEGFHSVF ITDQAELEAF AKRALDSSVL AIDTEFLREK TYYARLCLLQ MQTDDETIIV DPFAVSDLGV LAPLFQSSSI MKIVHSGRQD LEILNREVGL LPQPLFDTQV AAALLGHTQQ IGYGSLVSAV CGVQLAKMDS FTDWSRRPLS ASQISYAADD VIYLPQLYHT MTDELERLGR IHWLDPDFAA LIDPALYVDD PRDRYRRLKR VGQLSRRQLS AAREVAAWRE KRARDRDIPR KWVMTDEQVV EACKREARTI DSLFMVRGLS DRLSTGDART VVRCICRGLD LEPDKWPKSD HVAYGGDVNV DAVLDAMTAL VRLRARQNNI AFQTLASHSD LVKVAHGHKD AEILRGWRRE IVGAELLELL AGRISLSVQE GALKVTKHP
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