Gene Ccel_3485 details

Gene Information

• Locus tag: Ccel_3485
• ID: 7312042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: -
• Start bp: 4062507
• End bp: 4064390
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643610397
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002507752
• Protein GI: 220930843
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTATT TCGCCGGAAA TTATGATATA GTTGTTGTAG GTGGCGGACA TGCCGGGTGT 
GAAGCCGCAC TGGCAGCAGC AAGGCTTGGA TGCAGTACGA TAATATTTTC AATTAACCTT 
GACAGTATTG CCAATATGCC ATGTAATCCA AGTATAGGTG GGACTGCCAA GGGGCATCTT 
GTTAGGGAAA TAGATGCTTT GGGTGGACAG ATGGGTAAGG CCACGGATAA AACATTTATT 
CAGTCCAAAA TACTTAATTC CTCAAAGGGG CCTGCTGTTT ATTCCCTACG TGCCCAGGTA 
GACAGAAGAC AATATCAGAT GGAAATGAAA AACATACTGG AAAAACAGGA AAACCTTGAT 
ATAAGACAGT CAGAGGTAGT TGAAATACTG ACTGATGAGA ATAAGACAAA GGTTACAGGT 
GTAAAGACTC ATACTGGAGC CATATTTCAT TGTAAAGCAG TTGTACTCAC TACAGGGACA 
TACCTGAAGG GAAGAATTTT TATTGGTGAC GTAAACTACA GTGGAGGTCC TGATGGCCTG 
TTTCCTGCAA ATAAATTATC AGAAAGCTTA CAAAACCTTG GATTAAACTT GATTAGGTTT 
AAGACGGGTA CTCCGGCCAG ACTCAACAGG CAGAGTCTGA ACTTTTCAAA GATGTCAGAA 
CAACCAGGTG ATGATGTAAT TGTGCCGTTT TCCTTTGAAA CAGAAAAAAT AGATAAGGAA 
CAAGTTTCAT GCTGGCTGAC ATATACCAAT CAGGAGACTC ATGAGGTTAT CAAAAGAAAT 
ATTCACAAAT CACCTCTATA CAGTGGAAAT ATAACAGGAG TTGGTCCAAG GTATTGTCCT 
TCAATAGAAG ACAAGGTAGT TAGGTTTTCA GATAAGGAAC ATCATCAGGT TTTTGTGGAG 
CCTATGGGCC TAGAAACTGA AGAAATGTAT CTGCAAGGAA TGTCAAGCAG TCTTCCTGAA 
GACGTACAAA TAGAATTTAT GAGAACTATA CCGGGCCTTG AAAATGTAAA AGTAATGAGA 
AGTGCTTATG CAATTGAATA TGATGGGATA GATGCTACTC AACTTAAGTT ATCTTTAGAA 
TATAAAGATG TGGCCGGATT GTTTTCAGCA GGACAAATAA ATGGAAGCTC AGGCTATGAG 
GAAGCTGCCG CACAGGGTAT TGTTGCCGGA ATAAATGCAG TGATGAAGAT CAAGAACAGA 
GAGCCTTTAG TATTTGACAG GTCCCAAGCA TATATAGGTG TGCTCATTGA TGACCTTGTC 
ACAAAGGGAA CAAAGGAACC ATACAGAATG ATGACATCCA GAGCGGAATA CAGGCTTCTT 
CTCAGGCAGG ATAACGCTGA CTTAAGATTG ACGCCCATAG GCAGAGAAAT AGGATTGATT 
AGTGAAGAAC GCTATAAGAG ATTTCTTGAG AAGAAGGAAA TGATAGAGAA AGAAATAGAA 
AGACTTAAAA AAACTTATCT TCCGCCGAGT GAAAAGGTAC AAAGCTATCT TGAAAATAGA 
AACAGTACGG CTATAAAAAG TGGAATTCAG GTAACAGAGC TTCTTAGGAG ACCGGAAATA 
AGCTATGAGA GCCTTTCAGA AATATGTGAG CTTCCCGATC TACCCAGAGC TGTACGTGAG 
CAGGTTGAAG TTGCCGTGAA ATATGAGGGT TATATTAAGA GGCAGATGCA GCAGGTAGAG 
CAGTATAAAA AACTTGAAGG CAGAAAATTA CCGCATGATA TTGATTATAA TGAGATACAG 
GGGTTAAGGT TGGAAGCAAG ACAAAAATTG TCACAAATAA AGCCTGACTC TATAGGACAA 
GCATCCAGAA TAACTGGGGT GTCTCCTGCT GATATTTCGG TATTACTTAT ATATCTTGAA 
CAGGTTAAAA GAAAAAGAGA TTAA 

 

Protein sequence

MDYFAGNYDI VVVGGGHAGC EAALAAARLG CSTIIFSINL DSIANMPCNP SIGGTAKGHL 
VREIDALGGQ MGKATDKTFI QSKILNSSKG PAVYSLRAQV DRRQYQMEMK NILEKQENLD 
IRQSEVVEIL TDENKTKVTG VKTHTGAIFH CKAVVLTTGT YLKGRIFIGD VNYSGGPDGL 
FPANKLSESL QNLGLNLIRF KTGTPARLNR QSLNFSKMSE QPGDDVIVPF SFETEKIDKE 
QVSCWLTYTN QETHEVIKRN IHKSPLYSGN ITGVGPRYCP SIEDKVVRFS DKEHHQVFVE 
PMGLETEEMY LQGMSSSLPE DVQIEFMRTI PGLENVKVMR SAYAIEYDGI DATQLKLSLE 
YKDVAGLFSA GQINGSSGYE EAAAQGIVAG INAVMKIKNR EPLVFDRSQA YIGVLIDDLV 
TKGTKEPYRM MTSRAEYRLL LRQDNADLRL TPIGREIGLI SEERYKRFLE KKEMIEKEIE 
RLKKTYLPPS EKVQSYLENR NSTAIKSGIQ VTELLRRPEI SYESLSEICE LPDLPRAVRE 
QVEVAVKYEG YIKRQMQQVE QYKKLEGRKL PHDIDYNEIQ GLRLEARQKL SQIKPDSIGQ 
ASRITGVSPA DISVLLIYLE QVKRKRD