Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3445 |
Symbol | |
ID | 7312004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 4009196 |
End bp | 4010257 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643610354 |
Product | TPR repeat-containing protein |
Protein accession | YP_002507713 |
Protein GI | 220930804 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGTG ACAGGTTTTT ACTTATAAAG GCATGGGGAT GCGGCTTTTG GTCGGATGTG GATCATGTAA TGGGTCAGCT TCTTGCTGCT GAACTGACGG ACAGAATACC TGTAGTTTAC TGGGGGCCCA ATAGCCTTTA CGCAGAATCA TTCAAGACAA ACGCCTTCGA GCTTTACTTT GAACCAGTCT CCAACTATAA CATAAACGAT GTGATAAAGT ACAATTATAC TTATTTTCCT TCCGTTTGGA ATTACAACAA TGTTATGATT GAAGATTTGG ATAAGGTAAC ATGGACATAC CGTAATCTCG GCGAAATGAT GAACAGTGAC GTAAACGTAC TGGTAAGTGA TGTCCATTAT TTTATAAGGC CCTTGATTAA CTATATAACA AAGAAACACT GGGCTTACGG TATGACCGCA CACCAGATAT ATAGGGGTTT GTTTGACAAG TACCTAAAAC TCAAACCGGA CATAGAACAA GAAATTCAGG ACTTTTATGA TGAAAAACTC AAGGGTAAAG GACTATCTCT TGCTGTCCAC ATCAGGGGCG GGGATAAAGT CAGGGAAGTA GAAAATCTCG GTCGCTTGAA CAAGCGATAC TATAAGGAAA TCGAAAATTT TAACTCCAGT TACGATATAG GGAAAATACT TCTACTTACT GATTGCGAAG ACATTTTAAA TGAATTTTTA AAGCTATATG GAGACAAGGT AGTTTTTACT GATTGCAGAA GAGGAGCCTT AAGTGCGACA CAGGATGCAC CCCACCTGCA GGATTATTCT GCAAAAAGGC GTAAAGGAAT TGAAATTATA AAAGATACGT ATCTTGGCTC AAAATGTGAT TTCTTTATTG GAAATGGATA TTCCAATGTT TCTTATACAA TAAAACGGTT GAAGGATTGG CCGGAGCAAA ACATTATCCT ATTTTACAGG GATTTAAAGA ATGAAAAAAA GCTTGCCAGA AGGAGAGTGA AGGAAGAGGG TAACAGAAGG CTGCTGGAAA GAAAAAATCA CAAGTTGGAG TACCCTGAAT TTTATGGAGG TGTTAACACT TATGTCGAAT AG
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Protein sequence | MPSDRFLLIK AWGCGFWSDV DHVMGQLLAA ELTDRIPVVY WGPNSLYAES FKTNAFELYF EPVSNYNIND VIKYNYTYFP SVWNYNNVMI EDLDKVTWTY RNLGEMMNSD VNVLVSDVHY FIRPLINYIT KKHWAYGMTA HQIYRGLFDK YLKLKPDIEQ EIQDFYDEKL KGKGLSLAVH IRGGDKVREV ENLGRLNKRY YKEIENFNSS YDIGKILLLT DCEDILNEFL KLYGDKVVFT DCRRGALSAT QDAPHLQDYS AKRRKGIEII KDTYLGSKCD FFIGNGYSNV SYTIKRLKDW PEQNIILFYR DLKNEKKLAR RRVKEEGNRR LLERKNHKLE YPEFYGGVNT YVE
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