| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3445 |
|---|
| Symbol | |
|---|
| ID | 7312004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 4009196 |
|---|
| End bp | 4010257 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643610354 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_002507713 |
|---|
| Protein GI | 220930804 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGTG ACAGGTTTTT ACTTATAAAG GCATGGGGAT GCGGCTTTTG GTCGGATGTG
GATCATGTAA TGGGTCAGCT TCTTGCTGCT GAACTGACGG ACAGAATACC TGTAGTTTAC
TGGGGGCCCA ATAGCCTTTA CGCAGAATCA TTCAAGACAA ACGCCTTCGA GCTTTACTTT
GAACCAGTCT CCAACTATAA CATAAACGAT GTGATAAAGT ACAATTATAC TTATTTTCCT
TCCGTTTGGA ATTACAACAA TGTTATGATT GAAGATTTGG ATAAGGTAAC ATGGACATAC
CGTAATCTCG GCGAAATGAT GAACAGTGAC GTAAACGTAC TGGTAAGTGA TGTCCATTAT
TTTATAAGGC CCTTGATTAA CTATATAACA AAGAAACACT GGGCTTACGG TATGACCGCA
CACCAGATAT ATAGGGGTTT GTTTGACAAG TACCTAAAAC TCAAACCGGA CATAGAACAA
GAAATTCAGG ACTTTTATGA TGAAAAACTC AAGGGTAAAG GACTATCTCT TGCTGTCCAC
ATCAGGGGCG GGGATAAAGT CAGGGAAGTA GAAAATCTCG GTCGCTTGAA CAAGCGATAC
TATAAGGAAA TCGAAAATTT TAACTCCAGT TACGATATAG GGAAAATACT TCTACTTACT
GATTGCGAAG ACATTTTAAA TGAATTTTTA AAGCTATATG GAGACAAGGT AGTTTTTACT
GATTGCAGAA GAGGAGCCTT AAGTGCGACA CAGGATGCAC CCCACCTGCA GGATTATTCT
GCAAAAAGGC GTAAAGGAAT TGAAATTATA AAAGATACGT ATCTTGGCTC AAAATGTGAT
TTCTTTATTG GAAATGGATA TTCCAATGTT TCTTATACAA TAAAACGGTT GAAGGATTGG
CCGGAGCAAA ACATTATCCT ATTTTACAGG GATTTAAAGA ATGAAAAAAA GCTTGCCAGA
AGGAGAGTGA AGGAAGAGGG TAACAGAAGG CTGCTGGAAA GAAAAAATCA CAAGTTGGAG
TACCCTGAAT TTTATGGAGG TGTTAACACT TATGTCGAAT AG
|
|---|
| Protein sequence | MPSDRFLLIK AWGCGFWSDV DHVMGQLLAA ELTDRIPVVY WGPNSLYAES FKTNAFELYF
EPVSNYNIND VIKYNYTYFP SVWNYNNVMI EDLDKVTWTY RNLGEMMNSD VNVLVSDVHY
FIRPLINYIT KKHWAYGMTA HQIYRGLFDK YLKLKPDIEQ EIQDFYDEKL KGKGLSLAVH
IRGGDKVREV ENLGRLNKRY YKEIENFNSS YDIGKILLLT DCEDILNEFL KLYGDKVVFT
DCRRGALSAT QDAPHLQDYS AKRRKGIEII KDTYLGSKCD FFIGNGYSNV SYTIKRLKDW
PEQNIILFYR DLKNEKKLAR RRVKEEGNRR LLERKNHKLE YPEFYGGVNT YVE
|
|---|
| |