Gene Ccel_3410 details

Gene Information

• Locus tag: Ccel_3410
• ID: 7312489
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: -
• Start bp: 3961510
• End bp: 3963429
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643610315
• Product: glycoside hydrolase family 3 domain protein
• Protein accession: YP_002507678
• Protein GI: 220930769
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1472] Beta-glucosidase-related glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCTTAA AAGGACTGGG AAGAGTACTT CTGACTACTT TGCTGGCAAT GTCTCTATGT 
TGCTGCAGTA ATACCGGATC AAATACCCGC AAGGTTTCAA ATAAACCCTA TATTTCCACA 
AACAGCGGAA ATAATTCAGA AGTAACAGCA ATATACAATA AACAAAAATC GATCAAGGAT 
AATATATCAG CATACATAAG CAAGATGACA TTGGAGGAAA AAGTAGGTCA GATGATTATG 
GCGGAAAAGG ACTATATTTC GGCTCATGAT GTAAAAACCT ATGGTGTTGG ATGTGTGTTT 
GCGGAAGGTG GTTCAGCTCC CAAGGACAAT AATCCGGACG GCTGGAGGTC AATGATAGAA 
ACATATAAAA AGGCCGCAAA TGATTCGAGA TTGTCAATAC CACTTTTATT TGCCACAGAT 
GCAGTTCATG GTAACAACAA CATGAAGGAT ACCATTATTT ATCCTCATAA TATCAGTCTG 
GGAGCCACAC GTAACGGAAA ACTTACAAGG CAAATCGGAG CTGCTGTGGC AGATGAATTA 
AAAGCAATAG GAGTAGATTG GACATTTTCG CCGTGTGTTG CAGTAAGCAA TGACATAAGA 
TGGGGAAGGG ATTATGAATG TTTCAGCGAG ACCCCAGATC TTGTGACTAT GATGGCAACT 
GCTTTGATAA CAGAACTCCA GAACAAAGGG ATAATTGCCT GTGCAAAGCA CTACGTGGCA 
GATGGAGCGG TTGAATTTGG TTCAGGTACC AACGGACTGC TGGATCGTGG AAACACAAAC 
ATCAGCACGG AAGAACTTAA AGATAAATAT ATATCTGTTT ATAAGGATGC AGTTAAATCA 
GGCGTTAAAA CAATTATGGT ATCGTACAGC AGTATAAAGG GTCGAAAAAA CCATTCGGAA 
AGAGATCTTA TAGAATATAA GCTTAAGCAG GATATAGGCT TTCAAGGAAT TGTAATCAGC 
GACTACGAGG GCGTTGAATA TCTGGACGGG AACAGTCTTT ATACTAAGGT AGTAAATGCA 
GTTAATGCCG GAATTGACGT ACTAGTTGAA GGGAAGCGGT GGAAGGAAAC CTATAAATGT 
TTACTTGAGG CAGCAAGTCA GAAGAGGCAG GATGTAAATA TGGACAGGAT TGATGATGCT 
GTTTCGAGGG TTTTAAGAGT AAAAATGGAA ACAGGTAAAT TTGAAGGAAA AGACGTGACA 
AATAAGAACT ATAAGCTCAG GCAGACATCC AATGTTCAAC TTGCTGAACA GGCTGTAAAG 
GAGTCATTAG TTCTTTTGAA AAACAAGAGG AAAATACTGC CATTAAAAAA ATCAGACAAA 
GTTGCAGTCA TTGGACCAGC CTCTGATAAT ATTGGCGTAC AATGTGGCGG CTGGACAAAA 
ACCTGGCAGG GAGGACTGGA TGATGGAGAC GAAAAGTGGA TGAGTGGTAC CACTATTCTG 
GATGGATTTA AGGAAATGGC AGACAAGGGA GGCGGCCTTA TTATCACTGA CCCTTCAAGG 
GTAAAGGAGG CAGATGTCGT TCTAGCGGTT CTTGGAGAAC ACCCTTATGC CGAGGGAAAG 
GGCGATGAAA AAGCTCTCGG ATTAAGTGAC GGACTGGCCT TTAAAGAGAA TGCCGAAGTA 
CTGCGAATTG CATACCAATC AAATAAGCCT ATAGTTGTAA TTCTTGTATC AGGAAGGCCA 
AGGATAATCA CAAATGAGAT TAATAAGTGG GATGCTATGG TTGAGGCATG GCTTCCGGGG 
ACGGAAGGAA GGGCTGTTGC ACAGGTTATA TACGGAGAAA ACTGCAATTT TAAGGGGCGG 
TTGCCTGTGA GCTGGCCTAA ATCAGTTGAA CAACTTCCCA TTACCATTGA AAAGTTGGAT 
AATAACGAAG TATACGATGC CCTTTTCCAA TATGGATTCA GTCTGAAATA TTCAAATTAA 

 

Protein sequence

MSLKGLGRVL LTTLLAMSLC CCSNTGSNTR KVSNKPYIST NSGNNSEVTA IYNKQKSIKD 
NISAYISKMT LEEKVGQMIM AEKDYISAHD VKTYGVGCVF AEGGSAPKDN NPDGWRSMIE 
TYKKAANDSR LSIPLLFATD AVHGNNNMKD TIIYPHNISL GATRNGKLTR QIGAAVADEL 
KAIGVDWTFS PCVAVSNDIR WGRDYECFSE TPDLVTMMAT ALITELQNKG IIACAKHYVA 
DGAVEFGSGT NGLLDRGNTN ISTEELKDKY ISVYKDAVKS GVKTIMVSYS SIKGRKNHSE 
RDLIEYKLKQ DIGFQGIVIS DYEGVEYLDG NSLYTKVVNA VNAGIDVLVE GKRWKETYKC 
LLEAASQKRQ DVNMDRIDDA VSRVLRVKME TGKFEGKDVT NKNYKLRQTS NVQLAEQAVK 
ESLVLLKNKR KILPLKKSDK VAVIGPASDN IGVQCGGWTK TWQGGLDDGD EKWMSGTTIL 
DGFKEMADKG GGLIITDPSR VKEADVVLAV LGEHPYAEGK GDEKALGLSD GLAFKENAEV 
LRIAYQSNKP IVVILVSGRP RIITNEINKW DAMVEAWLPG TEGRAVAQVI YGENCNFKGR 
LPVSWPKSVE QLPITIEKLD NNEVYDALFQ YGFSLKYSN