Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3327 |
Symbol | |
ID | 7311898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3870210 |
End bp | 3871646 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643610230 |
Product | hypothetical protein |
Protein accession | YP_002507596 |
Protein GI | 220930687 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0224238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACAATC CCAGTAGCAA ACAATTTGTC TTTAAAGATT CCGAGGGGAA GCTGTGGAAT TTTTACTATG ATACCAGTCA GGGAATATGT TATAGTGTAT TTTCCAAAAG GATGGCATGG TCGGAGCCAC GGGTAGTCCA ACCAGAGGCC TACGAGCAAT TCTATGCTGA AATAGATGAA AAGGATTGCT TCCATATTAT ATATCAGGAT AAGAAAGGTA ATATTATTTA TTGTCTAATG CAGCAAAATG AGACAGTTAA GGCATTGCCT GTACTGACCA GTAAATCACA CTCTGTGTTT AATAAACATT TGTCGTTGAT CGTCGCTAAC AGCTGTGTAC ATATTTTCTT TATAATCGAG CATAACGGAA TATACATGCT TTCATATCAG ACGATAACAG ATGGTGTTCC TGTTGCACCA AAAAAAGTGG ATAATATAAC CGTACTTCCA AATCCTTACA TGGTAGTTTA TGACTTACAT GATGACATTT ACGTTTTTTA TCATATTTCT GACGGTAAAA ATAATCAAAT CGGTTATAAA AAGTACTCAA CCGTAAATAA AACCTGGAGT GAGTATTCAC AAATTACCAT GTTCTCATCT AATAGCCAGA ACCCTAGGTT AGTCGTTGAC AGAAACGGTA TCTTTCATAT TTGTTATGTA AGAAAACAGG ATAAACAGTT TCAGCTAGTA TATCAGCAAA AGATACCGGA CAGGAATATG TGGACATCGG AAAGCATACT GGCCGCTTCC AGTACCCCTA TTACCAATTT TTGCATACTG TCCGTCAAGA GCAGTCTGGT GGTTTATTAC ATAAAAGATG AGGCTCTGCA CTCATTTATT TCAAATGACT CCGGAGCTAG CTTCACAAAG TCCTCGAAAG GTGTGTCTCT TTCAAGGCAA CATATTTGCG TCAGATATAA ATCCAACAGT CCTTATGAGC ATATTCAGGC TGATGAAATA CCTGCATCCT TTGTTAATGG CTTTAAGCTT ATGTTTATTC ATGATTCTGT AGACTTGGAA AGTGGTCTGA ATACTGATGA AATGAGAGCT ATTATAACTA CGGAACTTAA ATTTCTAAAA AGACAGGTAG CGGATTTAAA AGATGCCCAG AAAATTATCT TTAACAATAT AAAATCACTT GAGACTAATC AACAAAATAT GGAACGTTCC CTTTTGAAAG AAATATCCAA AATAGTGATA GGCCTGAAGC CGGGAAAACC TAGTCCTGAA CTGGTACAGG CAAATAAAAG CACTTACATA TCAGAACCGT CGAATAATGT AAAGCATAAT AACAATCTTT ATACTCATTC CTTTACCAAT TTCCCAAAAT CCAGAGAGGA AATGAAACGT TTATTTGCAG ACAGGGTTAA GAAAAAGGCA CGTTTACTAA AAGATTTTAA GGGTGTATGG AAAATAAAAA GAAAGAAAAA TAAGTAA
|
Protein sequence | MYNPSSKQFV FKDSEGKLWN FYYDTSQGIC YSVFSKRMAW SEPRVVQPEA YEQFYAEIDE KDCFHIIYQD KKGNIIYCLM QQNETVKALP VLTSKSHSVF NKHLSLIVAN SCVHIFFIIE HNGIYMLSYQ TITDGVPVAP KKVDNITVLP NPYMVVYDLH DDIYVFYHIS DGKNNQIGYK KYSTVNKTWS EYSQITMFSS NSQNPRLVVD RNGIFHICYV RKQDKQFQLV YQQKIPDRNM WTSESILAAS STPITNFCIL SVKSSLVVYY IKDEALHSFI SNDSGASFTK SSKGVSLSRQ HICVRYKSNS PYEHIQADEI PASFVNGFKL MFIHDSVDLE SGLNTDEMRA IITTELKFLK RQVADLKDAQ KIIFNNIKSL ETNQQNMERS LLKEISKIVI GLKPGKPSPE LVQANKSTYI SEPSNNVKHN NNLYTHSFTN FPKSREEMKR LFADRVKKKA RLLKDFKGVW KIKRKKNK
|
| |