Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3108 |
Symbol | |
ID | 7311705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3643213 |
End bp | 3644415 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643610012 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_002507380 |
Protein GI | 220930471 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.315718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGGCA ATTTAATTTT CGAGATTGGT TTGGCGGTTG CATTAATAGC CATAGTGGGG CTGATATCAA AAAAGCTCCG TTTCTCAGTC ATTCCGTTTT ATATTCTGAT CGGGATGGCT GTGGGACCGC ATGCACCGCA TTTTGGTATA TTTGATTTAA GATTTATTGA AAGCTCCACA TTTATTGAGT TTATGGGCCG CTTGGGTATG CTTTTCCTTC TTTTTAGTCT AGGCATGGAG TTTTCTGTCT CAAGGTTTGT AAAATCAGGG AAATCAATAT TGACGGGTGG TTTATGCTAT ATAGCAATCA ACTTTTTCAC CGGTTTGATG ATAGGCTGGA TCGGAGGTCT TCCGATAAAT GAAACTCTGG TAATATGTGG TATTATGACC AGTTCCTCAA CAGCGATCGT TGCAAAGGTG CTAATGGACC TTAAACGAAC TGCTAATCGG GAAACTGAAA TAATTATGGG AATGATCATG TTTGATGATT TGTTCATTGC CATACATATT TCCATATTAT CAGGATTACT TTTAAGTGGA TCAAAGTCTG TATGGGGAAT TATCTTTACT GCGGCCACAG CTTTATTTTT TATACTATTC ATGCTGTTTG TAGGAAAGAG ATTAATCAAA TATCTGGACA AACTTCTGAA TATTCAGTCC ACGGAGTTGT TCCTGTTGAT AGTAATGGCA CTTCTGTTCC TGTTTGCGGG ATTTTCCGAG TCTCTGCATG TTGCCGAGTC TATAGGGGCA TTACTGGTCG GACTAGTATT TGCAGAGTCT GTACATGCAA AAAGAATAGA GCAAAACATT CTTCCTTTCA AGGATTTTTT CGGAGCCGTT TTTTTCTTCA GTTTCGGATT AACCATTGAC CCGATGTCGC TGGGCGGTGC AGTTTGGTTA GCAGTTGTTG CAGCGTTGCT TACGGTTGTA GGCAATATCG TTTCAGGTTT AATAGCGGGG CATATAGCAG GGATTACTGG CTCTGCCAGA GCAAATATTG GTCTTACATT GGCATCTAGA GGTGAATTTT CAATAATCAT GGCAAACATA GGCAAAGCCG GAGGGCTTAT GCCTGTCATA CAATCTTTTG CGGTGTTATA TGTGCTTATT TTAGCGATAG CCGGTCCGGT GATGTCCAAA CAATCAGTCC AAATTTATAA TGGATATCAA AAGATTTTCG GAAGAAAGAA AAGGGAGAAA TAG
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Protein sequence | MMGNLIFEIG LAVALIAIVG LISKKLRFSV IPFYILIGMA VGPHAPHFGI FDLRFIESST FIEFMGRLGM LFLLFSLGME FSVSRFVKSG KSILTGGLCY IAINFFTGLM IGWIGGLPIN ETLVICGIMT SSSTAIVAKV LMDLKRTANR ETEIIMGMIM FDDLFIAIHI SILSGLLLSG SKSVWGIIFT AATALFFILF MLFVGKRLIK YLDKLLNIQS TELFLLIVMA LLFLFAGFSE SLHVAESIGA LLVGLVFAES VHAKRIEQNI LPFKDFFGAV FFFSFGLTID PMSLGGAVWL AVVAALLTVV GNIVSGLIAG HIAGITGSAR ANIGLTLASR GEFSIIMANI GKAGGLMPVI QSFAVLYVLI LAIAGPVMSK QSVQIYNGYQ KIFGRKKREK
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