Gene Ccel_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3108 
Symbol 
ID7311705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3643213 
End bp3644415 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content40% 
IMG OID643610012 
Productsodium/hydrogen exchanger 
Protein accessionYP_002507380 
Protein GI220930471 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.315718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGCA ATTTAATTTT CGAGATTGGT TTGGCGGTTG CATTAATAGC CATAGTGGGG 
CTGATATCAA AAAAGCTCCG TTTCTCAGTC ATTCCGTTTT ATATTCTGAT CGGGATGGCT
GTGGGACCGC ATGCACCGCA TTTTGGTATA TTTGATTTAA GATTTATTGA AAGCTCCACA
TTTATTGAGT TTATGGGCCG CTTGGGTATG CTTTTCCTTC TTTTTAGTCT AGGCATGGAG
TTTTCTGTCT CAAGGTTTGT AAAATCAGGG AAATCAATAT TGACGGGTGG TTTATGCTAT
ATAGCAATCA ACTTTTTCAC CGGTTTGATG ATAGGCTGGA TCGGAGGTCT TCCGATAAAT
GAAACTCTGG TAATATGTGG TATTATGACC AGTTCCTCAA CAGCGATCGT TGCAAAGGTG
CTAATGGACC TTAAACGAAC TGCTAATCGG GAAACTGAAA TAATTATGGG AATGATCATG
TTTGATGATT TGTTCATTGC CATACATATT TCCATATTAT CAGGATTACT TTTAAGTGGA
TCAAAGTCTG TATGGGGAAT TATCTTTACT GCGGCCACAG CTTTATTTTT TATACTATTC
ATGCTGTTTG TAGGAAAGAG ATTAATCAAA TATCTGGACA AACTTCTGAA TATTCAGTCC
ACGGAGTTGT TCCTGTTGAT AGTAATGGCA CTTCTGTTCC TGTTTGCGGG ATTTTCCGAG
TCTCTGCATG TTGCCGAGTC TATAGGGGCA TTACTGGTCG GACTAGTATT TGCAGAGTCT
GTACATGCAA AAAGAATAGA GCAAAACATT CTTCCTTTCA AGGATTTTTT CGGAGCCGTT
TTTTTCTTCA GTTTCGGATT AACCATTGAC CCGATGTCGC TGGGCGGTGC AGTTTGGTTA
GCAGTTGTTG CAGCGTTGCT TACGGTTGTA GGCAATATCG TTTCAGGTTT AATAGCGGGG
CATATAGCAG GGATTACTGG CTCTGCCAGA GCAAATATTG GTCTTACATT GGCATCTAGA
GGTGAATTTT CAATAATCAT GGCAAACATA GGCAAAGCCG GAGGGCTTAT GCCTGTCATA
CAATCTTTTG CGGTGTTATA TGTGCTTATT TTAGCGATAG CCGGTCCGGT GATGTCCAAA
CAATCAGTCC AAATTTATAA TGGATATCAA AAGATTTTCG GAAGAAAGAA AAGGGAGAAA
TAG
 
Protein sequence
MMGNLIFEIG LAVALIAIVG LISKKLRFSV IPFYILIGMA VGPHAPHFGI FDLRFIESST 
FIEFMGRLGM LFLLFSLGME FSVSRFVKSG KSILTGGLCY IAINFFTGLM IGWIGGLPIN
ETLVICGIMT SSSTAIVAKV LMDLKRTANR ETEIIMGMIM FDDLFIAIHI SILSGLLLSG
SKSVWGIIFT AATALFFILF MLFVGKRLIK YLDKLLNIQS TELFLLIVMA LLFLFAGFSE
SLHVAESIGA LLVGLVFAES VHAKRIEQNI LPFKDFFGAV FFFSFGLTID PMSLGGAVWL
AVVAALLTVV GNIVSGLIAG HIAGITGSAR ANIGLTLASR GEFSIIMANI GKAGGLMPVI
QSFAVLYVLI LAIAGPVMSK QSVQIYNGYQ KIFGRKKREK