Gene Ccel_3087 details

Gene Information

• Locus tag: Ccel_3087
• ID: 7311686
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: -
• Start bp: 3621322
• End bp: 3621744
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643609991
• Product: single-strand binding protein
• Protein accession: YP_002507359
• Protein GI: 220930450
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000619635
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAATG TCAGTCTTGT GGGAAGGTTA ACAAAGGATG TTGATCTTAG GTATACCACC 
AAAAAAATGA GAGCGGTGGG ATCATTTACG TTAGCTGTAG ACCGGGATCT CAGAAAAGTA 
ACAAATGGTA AAACCGCAGA TTTTATACCG ATTGTTACCT GGGGAAAAAC TGCTGAGTTT 
GCAAGCAAGT ACTTTTCAAA GGGTCACCGT ATAGCCCTTC AGGGAAGCAT ACATACTAGG 
GTTTGGGAAG ATGAGGATAA AAACAGGCAC TATGTTACCG AAGTTGTCGC AGACAGGGTA 
TTTTTTGCTG ATGCAAAGCA AAGGGAATTC GATGAACCGG GTGAGGAGGA GTTGAAAGAG 
GCTAAATATG AACAGGAAAT AGAAGAATTA GACGAGGAAG TTTTATCAGG AGATAAAGCG 
TAA 

 

Protein sequence

MNNVSLVGRL TKDVDLRYTT KKMRAVGSFT LAVDRDLRKV TNGKTADFIP IVTWGKTAEF 
ASKYFSKGHR IALQGSIHTR VWEDEDKNRH YVTEVVADRV FFADAKQREF DEPGEEELKE 
AKYEQEIEEL DEEVLSGDKA