Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2547 |
Symbol | |
ID | 7312378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3072339 |
End bp | 3073244 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643609476 |
Product | peptidase M50 |
Protein accession | YP_002506855 |
Protein GI | 220929946 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000136347 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGTTA CAACATATAT TGAATTTCAG GTTAAAAGAA CAAGAATCCA GATAGATTTA TTAATTCTTC CTATATTTTT AGCGGCAATG ATAGGAAACC TTCTTCTGGA ATATTCTATT GCATTAGGGT TTATTATCTG CCATGAGCTA GGACATATCG CTTCTGCGGC AATGTGTGGG GTCAGGCTGA ACAGCTTCAG GCTTTTGCCG ATTGGTGTTA ATGCGTCTAT TGAGGATTTG CAATGCAGTA AACCTCAAAA GGTTTTGATT TATCTTACGG GCCCCCTAGT AAATATATTT TTTGCAATAA GCTTATATTG TATACATTTG TGGGAGGTTC CTGTGTGGTG GCCCTCTACC TTTAAAATAA TGCCGGCCGT AATAATAAAT TTATGGCTGG CTATTTTTAA CTTAATCCCA GTTCCTCCTC TAGACGGTGG AAAGATCGCA ATGGAACTAT TATCGGGAAG GCTAGGATTA TTTCGTGCAA ACAGACTTAT GCACATATTT TCATTATTTT TTTCTATTTT GATTATATCA GTTGGAACAG TGGTATTAAT TATAAGTAAA TACAATGCAA GTTTTATTTT AATAGGGGTT TACATTCTTC TTTTGTTGAA GAAAAACAAA AAGGAGGCCG CAATATTGAA TATGAAGAAC TTTGTTTTAA AACGTTCTGC CATTATTAGA AAAGGTATTT TTCCTGTGAG AGAAATTGTG GTTATGAAGG ATGTAAAGCT ACTTGATTTG GTAAAATCAA TGGATTATTC GGATGTATTT CATATAATAA AGGTACTGGA TAATGATTTG AATATTATAA AGACCGTAAC AGAACAGGAT GTTCTCAATA CTTTTATTGA GGGTATTACA GACATTACAG TAGAAGAAAT GCTTAATAAA AGATAA
|
Protein sequence | MSVTTYIEFQ VKRTRIQIDL LILPIFLAAM IGNLLLEYSI ALGFIICHEL GHIASAAMCG VRLNSFRLLP IGVNASIEDL QCSKPQKVLI YLTGPLVNIF FAISLYCIHL WEVPVWWPST FKIMPAVIIN LWLAIFNLIP VPPLDGGKIA MELLSGRLGL FRANRLMHIF SLFFSILIIS VGTVVLIISK YNASFILIGV YILLLLKKNK KEAAILNMKN FVLKRSAIIR KGIFPVREIV VMKDVKLLDL VKSMDYSDVF HIIKVLDNDL NIIKTVTEQD VLNTFIEGIT DITVEEMLNK R
|
| |