| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2081 |
|---|
| Symbol | |
|---|
| ID | 7310782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2439814 |
|---|
| End bp | 2441040 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643609014 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_002506406 |
|---|
| Protein GI | 220929497 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0336004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGTG TTTTTGATGT ATTGAAAGAA AGAGGGTTTA TCGCACAGAT TACCCATGAG
GACGAAGTAA AAAAGCTTTT AGGTGAAAAA AAGGTCACTT TCTATATCGG CTTTGATCCA
ACGGCTGACA GTTTACACAT TGGCCATTTT TTACAGCTAA TGGTTATGGC TCATATGCAG
CAGGCAGGCC ATATACCTAT AGTTCTTATT GGCGGCGGAA CTGCAATGGT TGGAGATCCT
TCGGGTAAGA ATGATATGAG AAAGATGATG ACTAGGGAAA TCATAAAGCA CAATGCCGAT
AGTTTTAAAA CTCAGATATC AAAGTTCATT GATTTTTCCG ACAACAAGGC ATTTATGGTG
GATAACAGCG AATGGCTTAT GGAGCTTAAC TATGTTCAGT TCCTTAGAGA TGTAGGTGTA
CACTTTTCTG TAAACAGAAT GCTTACTGCA GAATGTTTTA AAACAAGAAT GGAGAAGGGT
TTGACCTTCC TGGAGTTCAA CTATATGCTT ATGCAAAGCT ATGATTTCCT TGTTTTAAAC
CGGAAATATG ACTGTCAGCT GGAGTTGGGC GGTGACGACC AGTGGTCTAA TATTCTGGGG
GGAATCAATC TTGTAAGAAA GTCTGAAGCC AAGGAAGTTT ACGGAATGAC CTTCAAACTC
CTTACCACTA GTGAAGGTAA AAAGATGGGT AAAACTGAGA ACGGTGCAGT TTGGCTTGAT
CCTGAAAAGA CTACTCCATA CGAATTTTAC CAATACTGGA GAAATATTGA TGACAATGAT
GTTGAGAATT GTCTTGCCCT GATGACTTTC CTCCCTATGG ATGAGGTGAG AAGACTCGGT
TCATTGAAGG ATGCGGGAAT AAATGAGGCA AAAGCAGTGT TGGCATATGA GGTTACAAAA
ATTGTACATG GTGAGGATGA GGCAGGAAAA GCAAAAGAAG CGGCGGAGGC TATATTCGGA
GGTAAAGGTA AATCTGACAG TATACCGTTT ATTGAAATAA ATTCAGCAGA CCTTGAGGCG
GGAATAAAAA TAGCAGATTT ATTAATGGCT GCTGGACTGA CTCCATCCAA GAGTGAGGCA
AGGAGAGCCA TACAACAGGG CGGTGTACTT CTTAATGATA ATAAGATAAC CGGTTTTGAT
TATACAGTTG GTACCAATGA CCTTGTAAAC GGAGAAATGA TGCTTCAGAA GGGCAAGAAG
AACTTTGTAA AAATAAAGGT TGTTTAG
|
|---|
| Protein sequence | MSSVFDVLKE RGFIAQITHE DEVKKLLGEK KVTFYIGFDP TADSLHIGHF LQLMVMAHMQ
QAGHIPIVLI GGGTAMVGDP SGKNDMRKMM TREIIKHNAD SFKTQISKFI DFSDNKAFMV
DNSEWLMELN YVQFLRDVGV HFSVNRMLTA ECFKTRMEKG LTFLEFNYML MQSYDFLVLN
RKYDCQLELG GDDQWSNILG GINLVRKSEA KEVYGMTFKL LTTSEGKKMG KTENGAVWLD
PEKTTPYEFY QYWRNIDDND VENCLALMTF LPMDEVRRLG SLKDAGINEA KAVLAYEVTK
IVHGEDEAGK AKEAAEAIFG GKGKSDSIPF IEINSADLEA GIKIADLLMA AGLTPSKSEA
RRAIQQGGVL LNDNKITGFD YTVGTNDLVN GEMMLQKGKK NFVKIKVV
|
|---|
| |