Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2076 |
Symbol | |
ID | 7310777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2435121 |
End bp | 2436275 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643609009 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_002506401 |
Protein GI | 220929492 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000018802 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCT GCAAGGAATC AACCCACTAT GTATCACTAT ATATCGACGA TATGCTGGAA GAGTCTACGA AAAGAGAATT TGAAAAGCAT ATGAATGAGT GCGATAGATG TGCTGAAAAG GTTAAAGAAG CTCTTGCTTT AGTAGAGCTA TTAAGAGAAA GCGACGATAT AATGCTGCCG CAGAAATTTT CGTCTTCCCT CCATAATAGG CTGGTAGAAG TTGCGGAAAA TCAAAAAGAA AATAAAGGCA AGTTATTTAT ATATAACAAA AAGTTAATTG CGGGGCTATC AACAGCTGCT GTACTGGTAG TATCTTTGCT GGCATACAGC CTGCTTCCCC AAACTCCCCA TAACAGGCAG ATGACAAGCA TTTCAGCCGA TATTACTGCA CCCAAAGAGG TGAAGGATAG CACAAAGGAT GCCAATGTAT CCGGAAAGGA ATCAACACAG GAATCAACAC AGAAATCAAC ACAGGAGTCA AATACACAAA CAGGGGATAT TTATGTAACT CAACCTTCAT CAGACAAACT GGCGGCTGAC AATAGCAGTA CAACACAGCA TTACACAAAA AAAAGAGTTT TTGAGAAAAA AGATGAAAAC AAAGCTTTAT TAAAGTCAAG TAAAAGTACG AAAAAAACTG ATGAAGAATC AAAAGAGAAA ACGGAGTCAG TATACAAAAC AAAAATTGCT GAACAAACCA TTTCCCTTCA GTATTTTACG AATACAGCTG AAATGACTTT AAATTCGGCC CTGGATAAAG AAAATGAAGA TGAAGCCTTA AAAGGCCTAA TGTTAGAGTT AGGAGGCAAC GAGCTAACTT CTGACGACGA AACTATAGTA ATTATGACTC AAAAGAATTA TATCGATTAT GTCATTCCTT TGGACTCATT TACAAAAATT CAACAGCTGG CTTATGAAAA ATATAATCTG GAGCTTAGCA TAAAGCTGCC GGTCACAAAA GAGAATATTA CTGAACAATA TAAAGAACTT GAGAAACAGA TGGACGAATT AACCGAAAAA ATAAATGATA TGGAAATAAA AGGGAATGAC ACATTGATTC TGGAAAAAGA AAGAAATAAT TTATCTCAAA AGATGGATGA GATTATAAAG AATAATGGTA TGATAACAAT AAGAATATTT TTTGAAGATA AATAA
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Protein sequence | MDFCKESTHY VSLYIDDMLE ESTKREFEKH MNECDRCAEK VKEALALVEL LRESDDIMLP QKFSSSLHNR LVEVAENQKE NKGKLFIYNK KLIAGLSTAA VLVVSLLAYS LLPQTPHNRQ MTSISADITA PKEVKDSTKD ANVSGKESTQ ESTQKSTQES NTQTGDIYVT QPSSDKLAAD NSSTTQHYTK KRVFEKKDEN KALLKSSKST KKTDEESKEK TESVYKTKIA EQTISLQYFT NTAEMTLNSA LDKENEDEAL KGLMLELGGN ELTSDDETIV IMTQKNYIDY VIPLDSFTKI QQLAYEKYNL ELSIKLPVTK ENITEQYKEL EKQMDELTEK INDMEIKGND TLILEKERNN LSQKMDEIIK NNGMITIRIF FEDK
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