Gene Ccel_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2076 
Symbol 
ID7310777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2435121 
End bp2436275 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content35% 
IMG OID643609009 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_002506401 
Protein GI220929492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000018802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCT GCAAGGAATC AACCCACTAT GTATCACTAT ATATCGACGA TATGCTGGAA 
GAGTCTACGA AAAGAGAATT TGAAAAGCAT ATGAATGAGT GCGATAGATG TGCTGAAAAG
GTTAAAGAAG CTCTTGCTTT AGTAGAGCTA TTAAGAGAAA GCGACGATAT AATGCTGCCG
CAGAAATTTT CGTCTTCCCT CCATAATAGG CTGGTAGAAG TTGCGGAAAA TCAAAAAGAA
AATAAAGGCA AGTTATTTAT ATATAACAAA AAGTTAATTG CGGGGCTATC AACAGCTGCT
GTACTGGTAG TATCTTTGCT GGCATACAGC CTGCTTCCCC AAACTCCCCA TAACAGGCAG
ATGACAAGCA TTTCAGCCGA TATTACTGCA CCCAAAGAGG TGAAGGATAG CACAAAGGAT
GCCAATGTAT CCGGAAAGGA ATCAACACAG GAATCAACAC AGAAATCAAC ACAGGAGTCA
AATACACAAA CAGGGGATAT TTATGTAACT CAACCTTCAT CAGACAAACT GGCGGCTGAC
AATAGCAGTA CAACACAGCA TTACACAAAA AAAAGAGTTT TTGAGAAAAA AGATGAAAAC
AAAGCTTTAT TAAAGTCAAG TAAAAGTACG AAAAAAACTG ATGAAGAATC AAAAGAGAAA
ACGGAGTCAG TATACAAAAC AAAAATTGCT GAACAAACCA TTTCCCTTCA GTATTTTACG
AATACAGCTG AAATGACTTT AAATTCGGCC CTGGATAAAG AAAATGAAGA TGAAGCCTTA
AAAGGCCTAA TGTTAGAGTT AGGAGGCAAC GAGCTAACTT CTGACGACGA AACTATAGTA
ATTATGACTC AAAAGAATTA TATCGATTAT GTCATTCCTT TGGACTCATT TACAAAAATT
CAACAGCTGG CTTATGAAAA ATATAATCTG GAGCTTAGCA TAAAGCTGCC GGTCACAAAA
GAGAATATTA CTGAACAATA TAAAGAACTT GAGAAACAGA TGGACGAATT AACCGAAAAA
ATAAATGATA TGGAAATAAA AGGGAATGAC ACATTGATTC TGGAAAAAGA AAGAAATAAT
TTATCTCAAA AGATGGATGA GATTATAAAG AATAATGGTA TGATAACAAT AAGAATATTT
TTTGAAGATA AATAA
 
Protein sequence
MDFCKESTHY VSLYIDDMLE ESTKREFEKH MNECDRCAEK VKEALALVEL LRESDDIMLP 
QKFSSSLHNR LVEVAENQKE NKGKLFIYNK KLIAGLSTAA VLVVSLLAYS LLPQTPHNRQ
MTSISADITA PKEVKDSTKD ANVSGKESTQ ESTQKSTQES NTQTGDIYVT QPSSDKLAAD
NSSTTQHYTK KRVFEKKDEN KALLKSSKST KKTDEESKEK TESVYKTKIA EQTISLQYFT
NTAEMTLNSA LDKENEDEAL KGLMLELGGN ELTSDDETIV IMTQKNYIDY VIPLDSFTKI
QQLAYEKYNL ELSIKLPVTK ENITEQYKEL EKQMDELTEK INDMEIKGND TLILEKERNN
LSQKMDEIIK NNGMITIRIF FEDK