Gene Ccel_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1887 
Symbol 
ID7312295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand- 
Start bp2241300 
End bp2241932 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content37% 
IMG OID643608821 
Productendonuclease III 
Protein accessionYP_002506215 
Protein GI220929306 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.299157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AGGAAAAAGC CCTGCAAATG ATAGAAGTTC TTGACAAGCT TTACCCTGAT 
GCGGAGTGTT CCTTGAATTA TGAGAATCCG CTTCAGCTTT TGATTTCTAC TCAACTTGCA 
GCTCAATGTA CTGACGCAAG GGTAAATATT GTTGCAAAAG ATTTATATAA AAAATACCCA 
ACGGTTGAGG CATTTGCAAA TGCAGATATA AGTGAACTTG AGGAGGATAT TAAATCAACT 
GGATTTTACC GAAACAAAGC AAAAAATATT ATTGGCTGCT GTAAAATCAT TGTTGAAAAA 
TATAACGGGA CGATTCCCGA CAATATGAAA GAGCTGCTGG AATTACCCGG TGTAGGGCGT 
AAGACAGCAA ACTTATATTT ATATGAGATA CACGGGAAAC AGGGAATAGT TGTTGATACA 
CATGCTAAGA GGCTATCAAA CAGGACGGGT CTTACAAAAC ATGAAGACCC TGAGAAGATC 
GAGTACGATT TACAAAAGGT TATTCCTGAA AGCAGATGGG CAGATTTTTG CCATAAGTTG 
GTTTTTCATG GAAGGGCCGT GTGCAACGCA AGAAAACCTG GATGTGACAA GTGTGAAATA 
AATCATTTAT GCAGTTATTA TACTAAAAAA TAG
 
Protein sequence
MNKKEKALQM IEVLDKLYPD AECSLNYENP LQLLISTQLA AQCTDARVNI VAKDLYKKYP 
TVEAFANADI SELEEDIKST GFYRNKAKNI IGCCKIIVEK YNGTIPDNMK ELLELPGVGR 
KTANLYLYEI HGKQGIVVDT HAKRLSNRTG LTKHEDPEKI EYDLQKVIPE SRWADFCHKL 
VFHGRAVCNA RKPGCDKCEI NHLCSYYTKK