| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1684 |
|---|
| Symbol | |
|---|
| ID | 7310427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2028163 |
|---|
| End bp | 2029326 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643608612 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_002506015 |
|---|
| Protein GI | 220929106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATG AGATTTATCT TGATAACAGT GCTACCACGA AGCCATATGA TGACGTTGTA
GAATATGTTG CAAAAGTAAG TAGGGATTTT TATGGAAACC CTTCTTCTTT ACATACAAAA
GGTATCAAAT CAGAGAATCT TGTAAAAAAA GCAAGAACAC AGATCGCTGA ATCTTTAAAA
GTGGATTCAA AAGATATTTG TTTTACGTCA GGAGGAACTG AATCAAATAA TCTGGCAATA
TTGGGTTATC TGAAGGCAAA CCCAAGAGCC GGTAAGCATG TCATAACAAG TGAAATTGAG
CATCCCTCTG TTTTAGAAGT ATACAAGCAA TTAGCTCTGG AAGGATATAT AGTAGATTTT
ATTCCTGTTG ATAATAAGGG AGTAATCAGA TTGGATGTTT TAAAGGATAC TGTTTCAGAT
GATACATCTA TTATAAGTAT TATTCATACA AACAATGAAA CGGGCTCTGT TCAGCCAATA
GAAGAAATTT GTAATCTAAG GAACAAACTG TGTCCCAAGG CTGTAATCCA CATTGATGCG
GTTCAAGCTT TTGGCAAAAC ACTAATTAAC CCGTCAACCT GTAATATCGA CTTAATGTCT
ATTAGTTCTC ATAAAATACA CGGTCCCAAA GGTGTTGGAG GGTTGTATAT CCGTAAAGGA
CTAAGATTGA AACCTGTTTT AATAGGCGGA GGTCAGGAAT CTACATTGAG GTCGGGTACT
GAAAATGTAC CGGGTATTTG CGGCTTTGGA TTGGCAACAG AAATTATATT TTCAAAGCTT
GATGATAATT ATAAAAGAAC AAACGAACTT AGGAATCATT TCGTAAAAAG GATAAATGAA
ACATTTGCGG AATCGGTTGT GAACTCACCT GATAGTGCGT CACCGTATAT TATAAATGTT
TCATTCCCAA ATTTGAAATC AGAAGTTCTG CTGCACCACC TTGAACAAAG AAATATATTT
GTTTCCACCG GCTCAGCTTG TTCTTCACGT AAGACACATC ACAGCCATGT ATTAAAAGCC
ATGGGTGTAA GTTCCAAGTA TATAGACGGT GCAATACGTT TCAGTTTGTC ACATACTAAC
AATGTATCTG AAATGGATGA AACAATTGAG GCACTCAAAG AAATTATTCC GATAATCAGT
ATAAAACGTG GAGGGAAGAG ATGA
|
|---|
| Protein sequence | MINEIYLDNS ATTKPYDDVV EYVAKVSRDF YGNPSSLHTK GIKSENLVKK ARTQIAESLK
VDSKDICFTS GGTESNNLAI LGYLKANPRA GKHVITSEIE HPSVLEVYKQ LALEGYIVDF
IPVDNKGVIR LDVLKDTVSD DTSIISIIHT NNETGSVQPI EEICNLRNKL CPKAVIHIDA
VQAFGKTLIN PSTCNIDLMS ISSHKIHGPK GVGGLYIRKG LRLKPVLIGG GQESTLRSGT
ENVPGICGFG LATEIIFSKL DDNYKRTNEL RNHFVKRINE TFAESVVNSP DSASPYIINV
SFPNLKSEVL LHHLEQRNIF VSTGSACSSR KTHHSHVLKA MGVSSKYIDG AIRFSLSHTN
NVSEMDETIE ALKEIIPIIS IKRGGKR
|
|---|
| |