Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1455 |
Symbol | |
ID | 7310226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1767945 |
End bp | 1768253 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608381 |
Product | TrpR like protein, YerC/YecD |
Protein accession | YP_002505789 |
Protein GI | 220928880 |
COG category | [S] Function unknown |
COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02531] TrpR-related protein YerC/YecD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00161853 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCCA AATTAAGAGA TGAACATACA GACAGTTTAT TTGATGCAAT TTTACTTTTA AAGGACAGAG AAGAGTGTTA TAATTTTTTT GAAGATCTTT GTACTATTGC GGAACTCAAA GCTTTGGCAC AAAGACTTCA GGTAGCAAAA ATGTTAAGGG AAAAAAGAAC CTATACAGAG ATTTGTGAGC AAACCGGTGC TAGTACGGCT ACCATAAGCA GGGTCAACAG ATGTCTTGTT TACGGGGCTG ACGGGTATAA TACCGTACTT GATAGATTGC AAGAGAAAGA TGGGCAAATG AATGTTTAA
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Protein sequence | MNSKLRDEHT DSLFDAILLL KDREECYNFF EDLCTIAELK ALAQRLQVAK MLREKRTYTE ICEQTGASTA TISRVNRCLV YGADGYNTVL DRLQEKDGQM NV
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