| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1153 |
|---|
| Symbol | |
|---|
| ID | 7309961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1417027 |
|---|
| End bp | 1417701 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608075 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002505490 |
|---|
| Protein GI | 220928581 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC TACTTGTGGA AGACGATGCA CCCCTAGCTA TGGGAATTGA ATATGCATTG
AAAAAGCAGG ATTTTTCGGT ATCAATAGCA AAGAATATTA AAGAAGCCTA CCGAATATTT
AATGAAGAGG TACAATTAAT CCTGTTGGAT GTTACTCTTC CCGACGGAAA CGGATATGAT
TTTTGTAAGC AGGTACGGCA GACAAGCACT GTGCCAATAA TTTTCATGAC AGCTTTGGAC
GATGAACCCA ACGTAGTATT CGGACTTGAT ATCGGCGGAG ATGACTATAT TTCAAAGCCT
GTAAGAACCA GTGAATTGAT TTCCAGAATA AACGCTATTA TGAGAAGACA GAAGCAGACT
GACGGGTTAG ATACGGGTAG AATTACCAGC GGCAGTGTAG TGGTCGAGCC CCTGAAATGT
AAGGTTTGTG TAAATTCTCA GGAAGTTTTT CTTACTGCTG TTGAATATAA GCTATTGCTT
GTCCTTCTTG AAAATAAAGG GAAGGTAATG AGCAGAAACA CTATTATTGA GAAGCTCTGG
GATATTGACA GTAATTTTGT TGACTACAAC ACTCTGAATG TTTATATGAA AAGGCTCCGT
GAAAAAATTG AAACCGGAGA TGAAAAGCAC ATTGAAACAG TACGAGGGTT GGGGTATATG
TGGAAAGAAA GCTAG
|
|---|
| Protein sequence | MNILLVEDDA PLAMGIEYAL KKQDFSVSIA KNIKEAYRIF NEEVQLILLD VTLPDGNGYD
FCKQVRQTST VPIIFMTALD DEPNVVFGLD IGGDDYISKP VRTSELISRI NAIMRRQKQT
DGLDTGRITS GSVVVEPLKC KVCVNSQEVF LTAVEYKLLL VLLENKGKVM SRNTIIEKLW
DIDSNFVDYN TLNVYMKRLR EKIETGDEKH IETVRGLGYM WKES
|
|---|
| |