| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1116 |
|---|
| Symbol | |
|---|
| ID | 7309929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1374073 |
|---|
| End bp | 1375137 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608039 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002505454 |
|---|
| Protein GI | 220928545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTATTTCACT AGTAATGAGC TCTGTTCTGG CTGTATCGCT GCTTGCTGGA
TGTGGCTCAT CATCCGAAAC AAGTAATTCA ACAAATTCTG CTGCACCTTC TTCTGCCGCT
GCAAGCAGTG AAGCAAATGG CGATGCAGTT AAAACAGGAC TTGCTGTTAT GTCATCAATA
GCGAAATCCA AAGATGCTGA AAATGAAGAC GGACTTGCAC AGGTTGATTC AACAATAGTT
GCAGTTACAG TTGACAAAGA CGGTAAAATC GTTAAGTGTG CCATTGATGC AGCACAAACA
AAAATTAATT TTTCAGCAGC AGGTAAAATC ATAACTGACT TAAATACAGA ATTCAAGTCA
AAGCAGCAGT TGAAAATTGA ATATGGCATG AATAAAGCTT CCAAAATAGG GAAAGAATGG
AACGAACAAG CAGACGCTTT CGCAAACTAT GTTGTAGGGA AAACAGTTGA TGAAGTAAAG
GGAATAGCTG TAAATGCAGA AGGTGTTCCA TCAGATAAAG AGCTTTCAGC CACAGTATCA
ATACATATTG CAGACTTTAC TGCTGCAATT GAAAAGGCTG TGAATAATGC CAAAGATCTT
GGTGCAAAAG CCGGAGACAA GCTTGGTCTT GGCGTTACAA CAAATATCAG CAAGTCTGCT
GATGCAGGCG AAAAGGACGG AGTAGCACAG GCTTACTCGA ACTACTCAGC TACAACATTT
GATGCTGACG GTAAAGTAAC AAGCTGTATT ATTGATGCTT CACAGTCAGA TGTAAACTTC
TCAAAAACCG GAAAAATTAC CTCTGATTTA AAGGCTCCTT TAAGGACCAA AATTGAACTT
GGAGCTGACT ACGGCCTTGT CAAGGCTTCA AAGATTAAAA AGGAATGGTT TGAACAGACC
GAAGCTCTTG CAAAATATGC TGTAGGAAAA ACAATTGATG AAATTAAAGG TATTGCTGTA
AATGAAGAAG GAGTACCTTC TCAGGCTGAA TTGACAAGTT CAGTAACCAT CCATATAGGT
GACTATCAGA CAGTTATAGA AAAAGCAGTA GCTACTGCTA AATAA
|
|---|
| Protein sequence | MKKIISLVMS SVLAVSLLAG CGSSSETSNS TNSAAPSSAA ASSEANGDAV KTGLAVMSSI
AKSKDAENED GLAQVDSTIV AVTVDKDGKI VKCAIDAAQT KINFSAAGKI ITDLNTEFKS
KQQLKIEYGM NKASKIGKEW NEQADAFANY VVGKTVDEVK GIAVNAEGVP SDKELSATVS
IHIADFTAAI EKAVNNAKDL GAKAGDKLGL GVTTNISKSA DAGEKDGVAQ AYSNYSATTF
DADGKVTSCI IDASQSDVNF SKTGKITSDL KAPLRTKIEL GADYGLVKAS KIKKEWFEQT
EALAKYAVGK TIDEIKGIAV NEEGVPSQAE LTSSVTIHIG DYQTVIEKAV ATAK
|
|---|
| |