Gene Ccel_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1082 
Symbol 
ID7309897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1336318 
End bp1337106 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content40% 
IMG OID643608006 
Productphotosystem I assembly BtpA 
Protein accessionYP_002505421 
Protein GI220928512 
COG category[R] General function prediction only 
COG ID[COG0434] Predicted TIM-barrel enzyme 
TIGRFAM ID[TIGR00259] membrane complex biogenesis protein, BtpA family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGAC TAGAATTTAA GGACAAACCT ATCGTAATGG GAATGGTTCA TTGTCTTGCA 
CTACCTGGAA CACCTGATTT TTGCGGTGAT ATGAAGAAAA TAACCGACCA GGCTGTAAAG
GAAGCAATAA CACTTGAAAA GTCAGGAATG GATGCCATTA TTATTGAAAA TATGGGCGAT
AATGTGTTCG GAGTAAACAT GGACATTGAA CAGTCATGTG CTCTTGCGGC TATAAGTGCT
ATCGTTGCTC AAAATGTTAA TATACCTATC GGTATTGATG CAGCTATGAA CGATTACAAA
ACCGCATTAT CCATTGCAAA GGCAATAGGG GCTGATTTCG TAAGAATTCC GGTTTTTGTG
GATACAGTAG AATTTTTTGG AGGAATAATC CAACCTTGTG CAAGAGAGGC TATGAAGTTC
AGAAAGAACA TAGAAGCTGA AAACGTAAAG ATATTTGCAG ATATCCAGGT TAAGCACACA
CACATGGTAC TACCCCATGT AAGCATTGAG GATTCTGCAA AAGCTGCTGA AGCTTGCGGT
GCCGACGCCA TAATCGTAAC AGGTACCCAC ATAGGGGTTG AGACTCCCAT AGATATTATT
AAGAGAGTCA AAAAAGTAAT CAGTATACCT GTAATAGCCG GAAGTGGTGT AAAAACAAAC
AATATAAAGG AACAGCTTGG CATTGCAGAC GGTGCCATAG TAGGGTCCAG CCTGAAAGAG
GGCGGAAATA TAAAAAACCC TATTTCTCTG GAACTTTGTA CAGAACTAAT AAAAGCATTG
AATATATAA
 
Protein sequence
MKGLEFKDKP IVMGMVHCLA LPGTPDFCGD MKKITDQAVK EAITLEKSGM DAIIIENMGD 
NVFGVNMDIE QSCALAAISA IVAQNVNIPI GIDAAMNDYK TALSIAKAIG ADFVRIPVFV
DTVEFFGGII QPCAREAMKF RKNIEAENVK IFADIQVKHT HMVLPHVSIE DSAKAAEACG
ADAIIVTGTH IGVETPIDII KRVKKVISIP VIAGSGVKTN NIKEQLGIAD GAIVGSSLKE
GGNIKNPISL ELCTELIKAL NI