| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1038 |
|---|
| Symbol | |
|---|
| ID | 7309860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1290958 |
|---|
| End bp | 1293480 |
|---|
| Gene Length | 2523 bp |
|---|
| Protein Length | 840 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643607965 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_002505380 |
|---|
| Protein GI | 220928471 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.375354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA AAAGGCAAGT TATGGCGGGG TTAACTTCCG TCGAAGCAAA ACGATTGCAG
CAGCAATACG GCAAGAACGA ATTTACCCCC CAGAAAAAGG ATAGTTTTAT TAGAAAGGTC
TTACATATCA TATGTGAGCC GATGTTTCTT TTGCTGATTG TTGCTGCTAT TATTTATTTT
ATACTAGGTG AACCAAGAGA CGGTGCAATA ATGCTGATTT TCGTTATCGG TATTATCAGT
ATTGACGTTA TTCAGGAGTG GAAAACAGAC AAAACCTTGA ATGCACTTAA GGATTTGTCT
GCACCTCACA TAACGGTTAT AAGAGATGAT AAAGAAACGG TGATTGCCAG TACAGATCTT
GTGCCCGGTG ACTTGATGAT GATATATGAA GGTGTAAAAA TTCCCGCCGA TGGTATCGTG
GTCAAGTGTA ATGATCTTTG TGTGGAGGAA TCCTCACTTA CGGGTGAAGC CGAAGGCGTC
TGGAAAATCA CAAGCGGGAA TGCCGATTCA TCTAATGATT ACTGGCGCAA GGATTATTGC
TATGCAGGCA CGCTTGTTAT TCAGGGTACA GGAACTATAT TGGTTGATAA AATTGGTGCG
GAAACCGAGT ATGGTAAAAT CGGTATGAAT GTGGCAGCCG CTCCCAATGA GCCATCTCCT
TTGCAGAAGC AGACAGGTAA GTTGGTTAAA ACTTGTGCCG GAATTGCAGG TATATTGTTT
GCACTGGTGG GTGTATTCAC CTATTTTAAT ATCCCTGATC ACACTTTCGC AGACAGAGTG
GTTGAAAGTA TCCTTTCCGG CATCACACTG GCAATGGCGA TGATTCCCGA AGAATTCCCT
GTTATTCTGA CAGTATTTCT TTCTATGGGT GCATGGCGGC TGGCAAAGAA GCAGTCCCTT
GTCAGGAAGC TGCCGGCTGT TGAAACTCTT GGATCAGTAT CGGTACTGTG TGTGGATAAA
ACAGGCACAA TTACTATGAA CCAGATGGCG GTTCAGGAGG TTTGGTCACC GGACGGAAAT
GAAAACACTC TTATTGAGAC AATGGGACTT GCCTGTGAAT CAGATGCTTA CGATCCGATG
GAAAAGGCAA TGCTTGCTTA CTGCGATAAC CATGGAATTT CAAAGGAGGA CCTCTTTAGC
AGTGAGTTGA TCAGTGAATA TGCCTTTACA AACGAACTAA AAATGATGGG ACACGTTTGG
CACAGGAAGA ACGGGATTGT GATTGCAGCA AAGGGCTCTC CTGAACGGAT ATTGTCTATC
TGCAATCTGA GTGATAAAGA CAGAGAAATT ACAGAGCAAA AAGTTGCAGA GATGTCCAAA
GAAGGTCTGC GTGTGATTGC TGTAGCAATG GCATTACCAG AGTCAGAGGA GAATATTCCC
TCGAGTATTA CAGAATGCCG CCTTAATCTA TGCGGCTTAA TCGGTCTTTC TGATCCTCCC
CGTGAGAGTG TTAAATCCGA TATTGCGGTG TGCAGCAAAG CCGGTATTCG TGTTGTGATG
ATTACCGGGG ACAATGGAAT TACCGCCTCT TCAATTGCAA GAAAAATAGG AATGGAACAC
AGCGATAACA TAATTACAGG TGATATGCTT AATGAAATGT CCGACAATGA ACTGCGTGAG
GCGGTCAAGT CAGTGTCTAT TTTTTCTCGC GTTGTGCCGG AGCATAAGAT GCGGATTGTT
AAAGCATTTA AGGAAAACGG TGAAATCGTC GCTATGACGG GCGACGGCGT TAATGACGCA
CCAGCTCTGA AATATGCGGA CATTGGTATA GCCATGGGCA AGCGCGGTAG TGAGGTTTCA
AGGGAGGCTG CCGATCTCAT TTTGATGGAT GATAACTTTA CAACTATTAT TGAAACAGTA
AAAGATGGCC GGAGAATTTA TGACAATATC CGTAAGGCGG TTGGGTATGT ATTTACTATT
CATATCCCCA TTGCATTTAC ATCACTGCTA GGCCCTATTC TGGGAATTGC ACCTGCGGCG
TTAATGCTTC TGCCTTTGCA CGTTGTTTTG CTGGAGCTTC TGATCGACCC AACCTGTTCT
ATTGTACTGG AACGACAGCC TGCTGAAACG GATATTATGG AGCGAAGGCC GCGAAATCCG
AAAGATAAGC TTTTGAACAC GCGAACTTTA CTGAAAAGTG TTATTCAGGG ACTTGTGGTT
TTTGCCGCAT CTTTCGGCAC TTATTATACT GTACTTTGCG ACGATCCTGC TAGTGCAACT
ATTGCCCGTG CAATGGGACT TGCCATAATA ATGTTCTCCA ACCTGTTTCT TGTTCAGGTA
AACAGCTCTG ATTATGATTT TGCGGTTCAA TCGATTATCC GTCTATCAAA AGATCGGGTT
ATGTGGGCGG TCAATATAGG TACACTGCTA ATGCTTGCAA TTATTCTTTA TACACCGCTT
TCAGGTTTTC TGAAACTTGC ACCGCTTACG GCAGGACAGT TCTTTGGGTC AGCAGGTATA
GCTGCTGTAG CAGTGTTTTG GTATGAAATC GTTAAGTTGA TTAAGAGGTT CCGTAAAAAA
TAG
|
|---|
| Protein sequence | MTNKRQVMAG LTSVEAKRLQ QQYGKNEFTP QKKDSFIRKV LHIICEPMFL LLIVAAIIYF
ILGEPRDGAI MLIFVIGIIS IDVIQEWKTD KTLNALKDLS APHITVIRDD KETVIASTDL
VPGDLMMIYE GVKIPADGIV VKCNDLCVEE SSLTGEAEGV WKITSGNADS SNDYWRKDYC
YAGTLVIQGT GTILVDKIGA ETEYGKIGMN VAAAPNEPSP LQKQTGKLVK TCAGIAGILF
ALVGVFTYFN IPDHTFADRV VESILSGITL AMAMIPEEFP VILTVFLSMG AWRLAKKQSL
VRKLPAVETL GSVSVLCVDK TGTITMNQMA VQEVWSPDGN ENTLIETMGL ACESDAYDPM
EKAMLAYCDN HGISKEDLFS SELISEYAFT NELKMMGHVW HRKNGIVIAA KGSPERILSI
CNLSDKDREI TEQKVAEMSK EGLRVIAVAM ALPESEENIP SSITECRLNL CGLIGLSDPP
RESVKSDIAV CSKAGIRVVM ITGDNGITAS SIARKIGMEH SDNIITGDML NEMSDNELRE
AVKSVSIFSR VVPEHKMRIV KAFKENGEIV AMTGDGVNDA PALKYADIGI AMGKRGSEVS
REAADLILMD DNFTTIIETV KDGRRIYDNI RKAVGYVFTI HIPIAFTSLL GPILGIAPAA
LMLLPLHVVL LELLIDPTCS IVLERQPAET DIMERRPRNP KDKLLNTRTL LKSVIQGLVV
FAASFGTYYT VLCDDPASAT IARAMGLAII MFSNLFLVQV NSSDYDFAVQ SIIRLSKDRV
MWAVNIGTLL MLAIILYTPL SGFLKLAPLT AGQFFGSAGI AAVAVFWYEI VKLIKRFRKK
|
|---|
| |