Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0897 |
Symbol | |
ID | 7309738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1074607 |
End bp | 1075968 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643607834 |
Product | MATE efflux family protein |
Protein accession | YP_002505249 |
Protein GI | 220928340 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000262958 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGTT TAAAACTTAA GAACAAGGAA TTTTATTTGA AGCTTTTTTC GCTGGCCTTA CCGATAACTA TTCAGAACTT AATTTCTTCA TCTCTTGGCG TGGTTGACTC TGTAATGGTC GGTTCTCTGG GGAATCAGTC ATTAGCAGCC GTGGGTGTTG CCAACCAATA CGGTCTGATA GTATTTTTGC TATACAATGC AATCCACAGT GGGTGTGGTA TTTATGTGGC CCAATTCTGG GGTAAAAATG ACCACGATAA TATAGGAAGA GTGGTAAATC TGGATATTGC AATAGCAGCA AGTGTATCAT TGATACTTTC AGCTATAGGC ATATTGCTGC CAGAACAAAT TATATCGGTT TTTAATACCG ACCCGGTGGT TATTAGTCAG GGTGCAGATT TTTTAAGAAT ATTAAGTATG AGTTTTGTAT TTGCATCAAT AAGTTTTGGA TTCAGCGTAG CTCTAAGGAG TATAGGGAAG TCTACTATGC CGATGATAAT AAGTGCTTCA GCACTGGCCC TCAACACGAT TCTCAATTAT ATTCTGATAT ATGGAAGGTT TGGTATGCCA CAAATGGGGG TAAGGGGCTC CGCAACAAGT ACTTTAATAG CCAGAATAGT TGAAATGATT TTATTTCTTA TTGCCGTATC AAAATACTTT CCATTGCTGA AAATCAGAGT AAGCGAGCTT ATGAAGGTTA CGAAAGATTT GTTGGGAAGG GTTACCAAGA CCATGATACC TGTTATCCTT AATGAAATGT GTTGGGGACT GGGTACTGTG GTATATTCAA TTGCGTATGG CAGGATAAGT ACTGAGGCGT TTGATGCAGT TCAGATAACA AACAACGTAG TTAACCTGTT TACGGTAGCT GCTTTTGGTA TGGCCAGTGC AGCTGCGGTT ATGACAGGAC ATGTTATAGG TGCTGGGGAG GAAAAAAAAG GAAGGCAGTA TGCGTGGGGG TTTGTGCGAC TGTGTATAAT AGGAGGATTT ATTCTGGGTG GACTTCTATA CCTATTCTCT CCGTCGATTG TAAGCTTGTT CAAGGTAAGC AGTGATGTCC TTGAAACATC TATAATATTG TTGGCAATTA ACGCCATTAT TCTACCTATA AGGTTTACAA ACATAGTTGC CATTGTGGGA GTTCTGCGTG GAGGGGGAGA CGCTTCATTT GCTTTTATTG CTGAAGGCAT GACTATGTGG CTTATAGGGG TGCCGCTTTC CTTTATAGGT GCATTTGTTC TCAGACTTGA TGTTCAGTGG GTTGTCCTCA TGGTAATGGC GGAAGAGATT GTTAAAATGA TTTGCGGTGT TGCCAGATTA AGGTCAAATA AGTGGATAAA AAATGTTGTC AGAGAAATTT GA
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Protein sequence | MQSLKLKNKE FYLKLFSLAL PITIQNLISS SLGVVDSVMV GSLGNQSLAA VGVANQYGLI VFLLYNAIHS GCGIYVAQFW GKNDHDNIGR VVNLDIAIAA SVSLILSAIG ILLPEQIISV FNTDPVVISQ GADFLRILSM SFVFASISFG FSVALRSIGK STMPMIISAS ALALNTILNY ILIYGRFGMP QMGVRGSATS TLIARIVEMI LFLIAVSKYF PLLKIRVSEL MKVTKDLLGR VTKTMIPVIL NEMCWGLGTV VYSIAYGRIS TEAFDAVQIT NNVVNLFTVA AFGMASAAAV MTGHVIGAGE EKKGRQYAWG FVRLCIIGGF ILGGLLYLFS PSIVSLFKVS SDVLETSIIL LAINAIILPI RFTNIVAIVG VLRGGGDASF AFIAEGMTMW LIGVPLSFIG AFVLRLDVQW VVLMVMAEEI VKMICGVARL RSNKWIKNVV REI
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