| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0866 |
|---|
| Symbol | |
|---|
| ID | 7309710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1041890 |
|---|
| End bp | 1043122 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643607803 |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_002505218 |
|---|
| Protein GI | 220928309 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAA AAAGAGTTGT CATCTCAGGA ATAGGTATAA TTAGTCCCAT AGGAGATTCA
ATTGACGATT TTTGGAATGC TGTATTGGAC GGTAAAAGTG GTATTAAATA CTTTTCAGAT
GAATATAGAC ACCTAAATAT TAATGGAGTT AAAGGTGGTG GCTATATTTC TCGCATTGAT
TTGAGTAGGT TTGAAATTAG AAAAGACAAA ATCAGACAGA TTAAGGATTC TGAGAAAACA
ACGAAAATGT TAATTTATGC AGGATTATCA GCTCTTGAGG ATGCAGGAAT AAAATATCCT
CTAGATGTTG AAAAGTATAA TTTAGGCATG ATTGTCGGAA CAGGAATGTC TTTGGCTGAA
CGCTATTCGG AAATACCATA CTCTGAAAGA AATCCCAAAT GGTTTCTTGA AACTTACCCA
AATATTCATT TAGCATATTT TTCAACAATT ACTTCTCTAA AAGGCTTTAG TAGTACAATT
GTTACTGCAT GTACGGGTGG CAGTCAGGCT ATAGGTACAG CTTTTAGAAT GATTTGCAAT
GGGGATGCGG ATATCATGTT GGCAGGCGGT GTGGATAGTA GATTTTCAAC ACCATATATA
TATGGATTTA GTCGTTTAAA TATGATAAAT ACTGAACAAG ATCTCTTAAG TGCAATGCGG
CCTTTTGATA GGAATCGAAG TGGTTTTGTT ATGGGTGAAG GCAGTTGTAT TCTGGTTATA
GAATCACTTG AGCATTGCAT GGAAAGAGGA GGAACCGCAA TATGTGAAAT TGTGGGATAT
GGAAATGCCT CAGATGCTAC CAGTTTAACT GACGCTAATT GTCATGGTAA GTATAGAGCT
ATGGATATGG CTCTTCGTGA TGCTGGAATA TCGATAGATC AGATTGACTA CATTAATTCT
CATGGAACAT CAACACAATC AAATGACAGA GAAGAAAGCA AAGCTATTAA GGAGCTTTTT
GGAAAGCGAG CATATGACAT ACCTGTTAAC AGTACAAAAT CAATTATTGG ACATACTTTC
GCAGCATGTG GAGCCATAGA AGCCGCGGTA TGTGCAAAAA GTATACTTTC CGAGAAAATT
CACAAAACTT TAAATTTTAC TTTAGGTGAC ATATATTGTG ATTTAAATTA TGTAAAAGAT
GACGTAATAC AAAAAAAGAT TGCTTATTGT ATCAGTAATA ATAGTTCTAT TGGGGGATAC
AATACTTCTT TGGTCTTTAA AGAAATTGAT TAA
|
|---|
| Protein sequence | MSRKRVVISG IGIISPIGDS IDDFWNAVLD GKSGIKYFSD EYRHLNINGV KGGGYISRID
LSRFEIRKDK IRQIKDSEKT TKMLIYAGLS ALEDAGIKYP LDVEKYNLGM IVGTGMSLAE
RYSEIPYSER NPKWFLETYP NIHLAYFSTI TSLKGFSSTI VTACTGGSQA IGTAFRMICN
GDADIMLAGG VDSRFSTPYI YGFSRLNMIN TEQDLLSAMR PFDRNRSGFV MGEGSCILVI
ESLEHCMERG GTAICEIVGY GNASDATSLT DANCHGKYRA MDMALRDAGI SIDQIDYINS
HGTSTQSNDR EESKAIKELF GKRAYDIPVN STKSIIGHTF AACGAIEAAV CAKSILSEKI
HKTLNFTLGD IYCDLNYVKD DVIQKKIAYC ISNNSSIGGY NTSLVFKEID
|
|---|
| |