| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0612 |
|---|
| Symbol | pyrB |
|---|
| ID | 7309480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 706888 |
|---|
| End bp | 707829 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643607552 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_002504973 |
|---|
| Protein GI | 220928064 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.295857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAA AATCCAAAGA TTTATTAGGA CTGAGGGATA TTTCGGCAGA AGAAATTGAG
TATATTCTGA ACACCGCCAA AACAATGAAA TGTATTGTTA CATCTAATAA CAAAAAAACA
GCACATTTAC AGGGAAAATC AATTATTACA CTATTCTACG AAAACAGTAC TAGAACGAGA
CTTTCATTTG AACTGGCTTC CAAATACATG GGAGCCAGTG CCGCAAATAT ATCAGCATCA
AGCAGCAGTG TACAAAAGGG CGAAACCTTA ATAGACACAG GAAAAACAAT TGATTCTATG
GGTTCGGATA TAATTATAAT GAGACATCCC ATGTCCGGTG CACCACATCT GCTGGCCAAG
AATGTAAAAT CCTCAGTAAT AAACGCAGGT GACGGTATGA ATGAGCATCC GACTCAAGCT
TTGCTGGACA TGTTTACCAT ACTGGAGAAG AAGGGTACAT TAAAAGGCCT GAAAGTTGCC
ATAATAGGAG ATATACTCCA CAGCCGAGTT GCCAGAAGCA ACATATGGGG ACTGACGAAA
ATGGGTGCGG AGGTTAATGT AGCAGGGCCT GCTACACTGA TACCGCCTGA GATTGAAAAA
ATAGGTGTAA ATGTTTTTAG TACGGTTCAG GAAGCAATGC TTGATGCTGA CGTTGTCATG
GGTCTTAGAA TTCAACTGGA GCGTCAGAAA AAAGGATTGT TCCCCACTAT AAGAGAATAC
TCAAGGTTTT TCGGAGTAGA CGATAAAAGG CTAAAGCTTG CCAAGGAGGA TGCAATAGTA
CTGCATCCGG GTCCTGTAAA CAGAGGGGTT GAGCTTTCTA GCTCAGTCAC AGACGGTGAA
CAGTCTTTCA TAGACGAACA GGTAACAAAT GGCGTTGCCG TAAGAATGGC TTTGCTATAT
CTTTTAACAA GGAGGGGAAT CGTTAATGAA GTTACTGATT AA
|
|---|
| Protein sequence | MNLKSKDLLG LRDISAEEIE YILNTAKTMK CIVTSNNKKT AHLQGKSIIT LFYENSTRTR
LSFELASKYM GASAANISAS SSSVQKGETL IDTGKTIDSM GSDIIIMRHP MSGAPHLLAK
NVKSSVINAG DGMNEHPTQA LLDMFTILEK KGTLKGLKVA IIGDILHSRV ARSNIWGLTK
MGAEVNVAGP ATLIPPEIEK IGVNVFSTVQ EAMLDADVVM GLRIQLERQK KGLFPTIREY
SRFFGVDDKR LKLAKEDAIV LHPGPVNRGV ELSSSVTDGE QSFIDEQVTN GVAVRMALLY
LLTRRGIVNE VTD
|
|---|
| |