| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0599 |
|---|
| Symbol | |
|---|
| ID | 7309469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 690145 |
|---|
| End bp | 690927 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643607539 |
|---|
| Product | RNA-binding S4 domain protein |
|---|
| Protein accession | YP_002504960 |
|---|
| Protein GI | 220928051 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2302] Uncharacterized conserved protein, contains S4-like domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000013354 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA ACGAATTATT AAAGATGGTT TCAAAGCTAG AGGATAGGGT GCTTGTTTCA
CGTTTGTTGG ACAAGATTGA ACAGTGCCGT TATTCCTCTT TTGCATATTC AGATTTCCTT
TCTCCTTACG AAGCTTCTGT TTCTAAAAAG ATTTTGGACA GAGTCAAGGA GGTTTTTTAC
AAACTAACGG GTGGATATGA TGGGGCAGAA AGAGTTATAA CTGTCATAAG CAATGATTTT
ATCGAAGAGG ATATACCATA TAGCACTCCC ATAAGCTTGT TGAGAATATC ACCTGTTACT
GAAAATAAGC TTTCCCATAG GGATTACCTC GGGTCGTTAC TTGGGTTGGG AATAAAGAGA
GAAAAAATCG GAGATATCCT TGTAAGTGAA AAATGTACAG ATGTTTTTGT TATTGATAAG
ATAGCGGAAT ATATATCTTA TAATTTGGAC AAAATTGGTA ATACAAAGGT TCATTGTGAA
TTATGTGATA TATATCAGTT TACTCCACCG CAAAAGAAGG TACGGAGCAT AAATACCACA
GTAGCTTCTC TGCGTGCTGA TTCTGTAGCA TCCAGTGGGT TTGGTTTGTC CAGAACAAAG
GTAATGGACT ATTTTAAAGC ACAGAAGGTT AACGTAAACT GGGAACTGGT GCAAAGCCCA
TCCAAAATGT TGACTGAGGG AGATGTGATT TCAATACGGG GAATGGGAAG AATTGTTCTT
GAAAAAGTTT TGGGTAATAC CAGAAAGGAT AGAATCAGTA TAATTATAAA ACGTTTCGAA
TAA
|
|---|
| Protein sequence | MDKNELLKMV SKLEDRVLVS RLLDKIEQCR YSSFAYSDFL SPYEASVSKK ILDRVKEVFY
KLTGGYDGAE RVITVISNDF IEEDIPYSTP ISLLRISPVT ENKLSHRDYL GSLLGLGIKR
EKIGDILVSE KCTDVFVIDK IAEYISYNLD KIGNTKVHCE LCDIYQFTPP QKKVRSINTT
VASLRADSVA SSGFGLSRTK VMDYFKAQKV NVNWELVQSP SKMLTEGDVI SIRGMGRIVL
EKVLGNTRKD RISIIIKRFE
|
|---|
| |