| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0552 |
|---|
| Symbol | |
|---|
| ID | 7309424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 637082 |
|---|
| End bp | 638749 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643607488 |
|---|
| Product | DNA mismatch repair protein MutS domain protein |
|---|
| Protein accession | YP_002504914 |
|---|
| Protein GI | 220928005 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTT TTTATATCAT TTTAGCAATA ACCGCCGGCT GCATAATTTT AAGTATAATC
GGAAAAATAT CCCGTACAAA TAAAAATAGA AAGCAAATAC GTGCCCAATG GGGGAAAGCA
CCTGTTACAA AGTATACTGC TGATATATAC AACTCGGTTA GAAATTATTT TGACAACAAT
AAAGACCAGG GAGAAAGTTT TTTCATAGAT GATATTACTT GGAACGATTT AGATATGAAT
AGAATTTTTT CCAGGTTAAA CATAACCTGT ACGGATGTTG GAGAAGAATA TCTGTATAAT
ATACTGAGGG AATTACTCTA TGACCAGAAT GAGCTGACAG AGCGGGACAG GCTGATAGAA
TATTTCAGAA CAAACCCCTC CCAACGTGAA AAGATTCAGT TGATATTATC CGGTTTGGGG
AAACTCCGGT ATTTAAGTAT ATCAGAATAT ATTAACGGTA AAAGAAGCGG GGGTGGCATA
AAGAGTATAT ACTATAAGAT TTTATCATTA ATCTTCATAG CATCAATTTT TGCCACAATA
TTTTACCCCG GAGCAATAGC CATTTTTCTG ATATCGCTGG CCGTAAATGT AGTAGTTTAT
TTCAAGGCCA GAGATCAGAT AGTAGGCCAC TTGCAATCAC TTGGATATAT TGTGAATATG
TTGGGAATTT CACGAAGAAT ATCAAAGCTC AATATAAAAG AACTTAATAC ATATTTAAAT
GAATTGAAAA AATGTACGGC TAAAGTTAAG GGAATAAGCG TGAATGCTTT TTACTTTTTA
TTTTATACAA GTGAAAACTA TTTATTTGAG CTTATTAAGA TATTTCTTCT TGGGGAACCG
ATTGCATTTC ACAGTATTTT TAAAATTGTA AACAAATACC GCCATGAAAT TGATTCCGTA
TATAGGACAA TTGGACTTCT TGATAGTCTT ATATCAGTGG CATCCTACAG GGAAAGCCTT
GATTATTTTA CAACGCCGGT TCTGACAAAA GATAATATCA ACAACAAAAA AATAGAATTT
ACTGATATGT ATCATCCCTT GATAAAAAAT CCTGTTACAA ATTCCTTTTC AGTAACAGGA
GGGGCATTGA TAACCGGGTC AAATGCCAGC GGAAAATCAA CGTTTCTCAA GTCGGTAGCA
ATAAATGCAA TTTTTGCTCA GACTATTTTC ACATGTCTTG CAAAAGATTA TTATTCCAGC
TATTTTAATA TTTACAGTTC TATGGCTCTG AGTGACAATC TTGAAATGAA TGAGAGTTAC
TACATTGTTG AAATAAAATC ACTTAAACGT ATCTTGAAGG GTCTCAACGA CCATGTTCCA
TGTTTCTGTG TCATAGACGA AGTGTTAAGA GGTACAAATA CTATCGAAAG AATTGCAGCA
TCCTCTGAGA TAATGAACTT TATAACAGAC AATAATTGTA TATGTCTTTG TGCTTCTCAC
GATATAGAGC TTACTCAGAT ATTAGCAGAT AAAGTTGAGA ATTACCACTT TCAGGAGTTC
TTTGAGGATG ACAACATAAA GTTTGACTAT AAAATATACC CGGGTAAATC AACTACACGC
AATGCTATAA AATTATTAAA AATACTCGGT TATGATGAAA GCATAGTTGA CAATGCCGAA
CAAAGAGCCT GTCAATTTAA CCAAAACGGC TATTGGTCTA AGGTATGA
|
|---|
| Protein sequence | MKFFYIILAI TAGCIILSII GKISRTNKNR KQIRAQWGKA PVTKYTADIY NSVRNYFDNN
KDQGESFFID DITWNDLDMN RIFSRLNITC TDVGEEYLYN ILRELLYDQN ELTERDRLIE
YFRTNPSQRE KIQLILSGLG KLRYLSISEY INGKRSGGGI KSIYYKILSL IFIASIFATI
FYPGAIAIFL ISLAVNVVVY FKARDQIVGH LQSLGYIVNM LGISRRISKL NIKELNTYLN
ELKKCTAKVK GISVNAFYFL FYTSENYLFE LIKIFLLGEP IAFHSIFKIV NKYRHEIDSV
YRTIGLLDSL ISVASYRESL DYFTTPVLTK DNINNKKIEF TDMYHPLIKN PVTNSFSVTG
GALITGSNAS GKSTFLKSVA INAIFAQTIF TCLAKDYYSS YFNIYSSMAL SDNLEMNESY
YIVEIKSLKR ILKGLNDHVP CFCVIDEVLR GTNTIERIAA SSEIMNFITD NNCICLCASH
DIELTQILAD KVENYHFQEF FEDDNIKFDY KIYPGKSTTR NAIKLLKILG YDESIVDNAE
QRACQFNQNG YWSKV
|
|---|
| |