| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0447 |
|---|
| Symbol | |
|---|
| ID | 7309326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 510975 |
|---|
| End bp | 511730 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643607377 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_002504809 |
|---|
| Protein GI | 220927900 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00576081 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTTT TTAACAGGAT ATTTCCCCAA AAGAAATTAA GCGATGATTT TCAATGTGTC
CCAAAGCATA TAGCAATAAT TCCTGACGGT AATGGTAGGT GGGCAAAGAA AAGAGGCTTA
CCCAGAAATG TAGGACATAG GGAAGGTTCA ATGACGCTTA AAAAGGTTGT TATTTACTGC
TCAAACATTG GAGTAAAACA TTTAACAATT TATGCTTTTT CGACCGAAAA TTGGAAAAGA
CCTCAAAGTG AAGTTGATGC ACTTATGAAC CTGCTTTTAG AATTTCTTCG TAATGCAGAA
AGAGAACTGG AAGGAAGCAA TGTCAGGATA AAGGTTATAG GTGATATTAA CGGACTACCT
GGGGAACTGC AAAATGAAAT AGCAAGGGTT GAAAAATTCA CTGGAGTAAA TAATGGATTA
AACTTAAATA TTGCATTAAA TTATGGTTCA AGGTTTGAAA TACTAAATGC AGTAAGAAAT
ATAGCCCAAG AAATTAAAAA CGGAAAACTT TCAATAAATG ATATAGACGA AAAACAACTG
GAGCAGCATT TGTATACGAA GGGAATCCCA GAGCCGGATT TGCTGATTAG AACCAGTGGG
GAGCAAAGAA TCAGTAATTA CCTGCTTTGG CAGTGTGCGT ATACGGAGTT CTGGTTTACC
GATACACTGT GGCCGGATAT TAACGACAGA CACATTGCTG ATGCAATAAA AGCTTTTGAG
AAAAGAAATC GAAGGTATGG TGGAGTAGAA AATTAA
|
|---|
| Protein sequence | MGFFNRIFPQ KKLSDDFQCV PKHIAIIPDG NGRWAKKRGL PRNVGHREGS MTLKKVVIYC
SNIGVKHLTI YAFSTENWKR PQSEVDALMN LLLEFLRNAE RELEGSNVRI KVIGDINGLP
GELQNEIARV EKFTGVNNGL NLNIALNYGS RFEILNAVRN IAQEIKNGKL SINDIDEKQL
EQHLYTKGIP EPDLLIRTSG EQRISNYLLW QCAYTEFWFT DTLWPDINDR HIADAIKAFE
KRNRRYGGVE N
|
|---|
| |