Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0193 |
Symbol | |
ID | 7309096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 215517 |
End bp | 216170 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643607121 |
Product | hypothetical protein |
Protein accession | YP_002504560 |
Protein GI | 220927651 |
COG category | [R] General function prediction only |
COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG GATTGACAGA ACTGGTATTT ATACTCGACA AGAGCGGCTC GATGAGCGGC CTGGAAACCG ACACCATCGG TGGATATAAC TCCATGCTCG TCAAGCAGCA GGAGGTTGAG GGTGAATGCC ACATTACTAC AGTATTGTTT GACAACAACT ACGAACTGCT CCACGATCGC ATTGACATCA GGGCGGTAAG CCCAATTACG GAGAAGGAAT ACCAAGTCGG CGGCTCCACC GCACTTCTCG ATGCAATCGG CAGAACGATA CATAAAATTG GAAACGCCCA AAGACAAACC GCCGAAGATT ATCGAGCCGA AAATGTGATG TTCGTAATTA TCACAGACGG TGAGGAAAAC TCAAGTCGCG AATACTCCGC CGAAAAGGTT AAGGTGCAGA TTGAGCGGCA AAAAACGAAA TATGGGTGGG AGTTCATCTT CCTCGGTGCG AACATCGACG CAGTTCAGAC CGCAGGGCGT TTCGGGATTG CCCCTGAAAG AGCCGTTGAC TATCTCGCGG ACAGTAAGGG TACAGAACTG AACTTCAAGG TAATGAGTGC CGCTGTGGCG ACTTTCCGTG AGGCGGGTAT GGTTGACGAA GCTTGCTTTG AGGAAATACG CCAAGATGTA AAGCAGAGGG GATTACGGAA ATAA
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Protein sequence | MRKGLTELVF ILDKSGSMSG LETDTIGGYN SMLVKQQEVE GECHITTVLF DNNYELLHDR IDIRAVSPIT EKEYQVGGST ALLDAIGRTI HKIGNAQRQT AEDYRAENVM FVIITDGEEN SSREYSAEKV KVQIERQKTK YGWEFIFLGA NIDAVQTAGR FGIAPERAVD YLADSKGTEL NFKVMSAAVA TFREAGMVDE ACFEEIRQDV KQRGLRK
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