Gene Ccel_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0193 
Symbol 
ID7309096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp215517 
End bp216170 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content49% 
IMG OID643607121 
Producthypothetical protein 
Protein accessionYP_002504560 
Protein GI220927651 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG GATTGACAGA ACTGGTATTT ATACTCGACA AGAGCGGCTC GATGAGCGGC 
CTGGAAACCG ACACCATCGG TGGATATAAC TCCATGCTCG TCAAGCAGCA GGAGGTTGAG
GGTGAATGCC ACATTACTAC AGTATTGTTT GACAACAACT ACGAACTGCT CCACGATCGC
ATTGACATCA GGGCGGTAAG CCCAATTACG GAGAAGGAAT ACCAAGTCGG CGGCTCCACC
GCACTTCTCG ATGCAATCGG CAGAACGATA CATAAAATTG GAAACGCCCA AAGACAAACC
GCCGAAGATT ATCGAGCCGA AAATGTGATG TTCGTAATTA TCACAGACGG TGAGGAAAAC
TCAAGTCGCG AATACTCCGC CGAAAAGGTT AAGGTGCAGA TTGAGCGGCA AAAAACGAAA
TATGGGTGGG AGTTCATCTT CCTCGGTGCG AACATCGACG CAGTTCAGAC CGCAGGGCGT
TTCGGGATTG CCCCTGAAAG AGCCGTTGAC TATCTCGCGG ACAGTAAGGG TACAGAACTG
AACTTCAAGG TAATGAGTGC CGCTGTGGCG ACTTTCCGTG AGGCGGGTAT GGTTGACGAA
GCTTGCTTTG AGGAAATACG CCAAGATGTA AAGCAGAGGG GATTACGGAA ATAA
 
Protein sequence
MRKGLTELVF ILDKSGSMSG LETDTIGGYN SMLVKQQEVE GECHITTVLF DNNYELLHDR 
IDIRAVSPIT EKEYQVGGST ALLDAIGRTI HKIGNAQRQT AEDYRAENVM FVIITDGEEN
SSREYSAEKV KVQIERQKTK YGWEFIFLGA NIDAVQTAGR FGIAPERAVD YLADSKGTEL
NFKVMSAAVA TFREAGMVDE ACFEEIRQDV KQRGLRK