Gene Ccel_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0172 
Symbol 
ID7309077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp194789 
End bp196132 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content38% 
IMG OID643607101 
Producthypothetical protein 
Protein accessionYP_002504540 
Protein GI220927631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATG CATATGAGCG ACAGTATCAT ATATTTAAGA CAATGGATAA TAATTGGGAA 
AACCCCAGCG GATTTATAAA AGTGGAAATC AACGACGATA ATACTCGTTT TCAGCTTTCT
TTGAATAATT TATCCGACAA TAAGGATTCA ACCTATAGCT TGTACGGTAT ACAAAAAGAT
AATAGTACAT TGGAATATAC AGACATATGC CGTATACTGC CTGTTAACGG CAGGGTTGAT
ATAAAAACAA ATTTTTCTTC TGATGAGATA GGCTCAAACA AGCTTAACGT GCATGATATA
AATATTTTTG CAGTAATATA CCGCAGTACG GATAAGTCTT CGGGTACGGT AAAGTGCCCC
TTGGTAGCAT ACGCAAAAGG TGAACAGGTG TGGAAAGGAG AATTTGAAAG AGTTCTTGAG
CAGCCCTCTT TGAAAATTGA AGCTTCTGCT GCTGCAATAG ACGCCGATGA CACTGCGGAA
ATTCCTGTAG CAATACAAAA TGAAAAAAAC GACGAACCTG AAACAGAGGA TATTAACATA
CAGTCTTGGA CTGTTCTTGA TGATGAATAT AGCAAAAATC CGATTGAACT GCTCGAATCC
GAAGGTACAG AGCGGGAACA GGAGAACATA GAAACATATG TTTCAGAAGA GGTGTCAGGA
CAGGAGAACA TAGAATCATA TGTTTCTGAA GAGGTGTCAG GACAGGAAAC AGACATCTCA
GACCTGTCAA GTAAATTTCA GGGTGACTTA TCAAGTGTGT ATCAAGATTC GTTTGAGGGA
GAAATGGAGG AAAACGATGA AAGCGGAGAT AATTCACAGG AAACGGGAGA AGTACAGGAT
GTTTGGAAAA AGATTCAGGA TGATTTTAAT GATATATCTT CAATAAGAAT AGATGAATCT
GCAAATATGG ATAAGTCCGA AACAGACATA GAACATCCTT TAAACATACA GCTTTTAAAA
CAGGAGCTTG ACAATAGCTT CGAGGAGTTT AACCCGTTCA AGACCAGAAA CAGAAGCTAT
AAATGGTGGA AGATAAACAG TCCCGGATTT CTAAACAACA TTCTTTTCAG GAATAATATT
AAGACATATC TTTTGTTTAA TCCAAAGGTA ATGCTTGCCC ATTATAAATA CAGGTATATT
ATCCTTGGGC TAAGAAACAA CAGGCAGCCA CAAAGAGAAA GGCTCATTTG CGGTATCCCC
GGAGTTTACA ACATAGATGA TAATCCCTTT GGCAGTGAGG GCAGCTGGGT ACAAATGGAG
GGATACAGAC CCAAATACGG AGCGTTCGGA TATTGGATTG TAACGCTTGA TCCAAGAACA
GGCAAAATAT CAAAAATGAA ATAA
 
Protein sequence
MGNAYERQYH IFKTMDNNWE NPSGFIKVEI NDDNTRFQLS LNNLSDNKDS TYSLYGIQKD 
NSTLEYTDIC RILPVNGRVD IKTNFSSDEI GSNKLNVHDI NIFAVIYRST DKSSGTVKCP
LVAYAKGEQV WKGEFERVLE QPSLKIEASA AAIDADDTAE IPVAIQNEKN DEPETEDINI
QSWTVLDDEY SKNPIELLES EGTEREQENI ETYVSEEVSG QENIESYVSE EVSGQETDIS
DLSSKFQGDL SSVYQDSFEG EMEENDESGD NSQETGEVQD VWKKIQDDFN DISSIRIDES
ANMDKSETDI EHPLNIQLLK QELDNSFEEF NPFKTRNRSY KWWKINSPGF LNNILFRNNI
KTYLLFNPKV MLAHYKYRYI ILGLRNNRQP QRERLICGIP GVYNIDDNPF GSEGSWVQME
GYRPKYGAFG YWIVTLDPRT GKISKMK