Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0160 |
Symbol | |
ID | 7309068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 184857 |
End bp | 185732 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643607089 |
Product | PSP1 domain protein |
Protein accession | YP_002504528 |
Protein GI | 220927619 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.100809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAGG TTGTAGGAGT TAGGTTTAAA AAGGCAGGCA AGATATATTA TTTTGATCCC GGCGAACTAG TGATAGATCT CAACCAGAAT GTCATAGTTG AAACCGCAAG AGGAATAGAA TTTGGTTTAG TAGTAGTTCC GAATAGAGAG GTTGACGAGT CTGAAATAGT TGCTCCGCTG AAAAAAGTAA TTAGAGTAGC AACAGAAGAA GATATTGCTC ACGCACAGGA AAACGATAGA AAAGAAAAGG ATGCATTTAA TATATGCCTG CAAAAAATCA GCGATCACAA TTTGGAAATG AAACTTATAG ATGTAGAATA TACGTTTGAC AATAATAAGA TTTTGTTTTA TTTTACGGCT GATGGAAGAG TTGATTTCAG AGAGCTGGTA AAGGATTTAG CATCAGTATT TAAAACCAGA ATTGAGCTTC GCCAGATTGG TGTAAGAGAT GAGTCGAAGA TGATGGGTGG GATAGGTATT TGCGGCAGAG TGCTTTGTTG TAATTCTTTT TTAGGAGAAT TCCAGCCCGT TTCAATAAAA ATGGCAAAGG AACAGTCATT ATCACTTAAT CCTACCAAGA TTTCAGGTAC CTGCGGCAGA CTTATGTGCT GTCTCAAATA TGAGCAGGAA GCGTATGAGG ACTTACTTTC CAGAGTGCCT AAGGTTGGTG CGATAGTTGA GACTCCCGAA GGACAGGGAA CTATTGTGGA TGTAATGCTA TTAAAGGAAA TTCTTACAGT TAGACTAGAT ATTGGCAATG AGTCCGACCT GCGGGTGTAT AACTTCAAGG ATGGAGAAAT AAAAGTAATA AAGGATGCAG CGGCCAGCTA CGACAGCGAT ATAGACCTTG AAGCCCTTAA ACAATTAGAG GATTAG
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Protein sequence | MVKVVGVRFK KAGKIYYFDP GELVIDLNQN VIVETARGIE FGLVVVPNRE VDESEIVAPL KKVIRVATEE DIAHAQENDR KEKDAFNICL QKISDHNLEM KLIDVEYTFD NNKILFYFTA DGRVDFRELV KDLASVFKTR IELRQIGVRD ESKMMGGIGI CGRVLCCNSF LGEFQPVSIK MAKEQSLSLN PTKISGTCGR LMCCLKYEQE AYEDLLSRVP KVGAIVETPE GQGTIVDVML LKEILTVRLD IGNESDLRVY NFKDGEIKVI KDAAASYDSD IDLEALKQLE D
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