| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5418 |
|---|
| Symbol | |
|---|
| ID | 5897204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010333 |
|---|
| Strand | - |
|---|
| Start bp | 129973 |
|---|
| End bp | 131364 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641550706 |
|---|
| Product | RND efflux system outer membrane lipoprotein |
|---|
| Protein accession | YP_001672192 |
|---|
| Protein GI | 167621684 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC GGCTGTTTTC CATAGTGCTC TGCGGCCTCG CTGTTCAGGG GTGCGCCGTG
GGGATCACCC CAGCCCCGCC CGCCGCCCGC GTGACCGCGC CCATCGCTTG GCGCGCGCCA
GCGGCCGGGG GGCAGCCTGC CGTCAGCCCG ACATGGTGGG ACGCCTTCGG GGACCCGGAG
CTTCGCCACG CTGTCGAAGC AGCCCTCTTG CACAACCTCG ACATCGCGGC GGCCGAAACG
CGGGTGCGAG AGGCGGACGC GCTTTTCGTC CAGGCCCACT CGGCGCTCGT GCCAACCCTT
ACCGCTTCCG TGGCGGTTCA GGACGCGCAG GCGTTGAACA GCCTCGGCCG AGCGAGCGAT
TCTGCGACGG CCCAGCCGCA ATTGCAAATC GCCTACGAAG TCGACCTCTG GCGCCGATTG
CGCCAAGCCG ATGCAAGCGC CCGGGCTTTG CTTCAGGCCA GCCAATATGG CAGGGCTGCT
GTCGCCCTCT CCATCGCCGG AGCAACCGCT CGTGGGTATA TCGGTTTGGC GTCGCTCGAC
GCCCAACTTC AGATCGCTCG CGAGACGCTC GCTTCGCGGG ATGAAGCCTT GAGACTGGCT
ACGCGTCGCG CCGACAACGG TGTTACTTCC CGTCTCGAAC TGACCCAAGC CCGATCCGAG
CGAGAAGGGG CGGCCCAGCG CGTCCCGGCG CTTGTGTTGG CCGTCGAGCG TCAAGAGAAT
GGTCTGCGCC TGCTGCTGGG GGGGCTCCCC GGACCTGTTC CCCGGGGAGC CATTTCGAGC
CTCACCTTGC CGACCGTCGC GCCGGGCCTG CCGTCCGAAC TGCTGCAACG TAGACCTGAC
ATCAGTCAGG CAGAAGCCCA GGTCCGTGCG GCAGACGCCG CGCTTGCCGC TTCGAAGGCG
GCTCTTCTGC CGCAAGTGCG TCTGACAGGC TCGGTGGGCG AGCTCTTCGT TCAGCATCTG
GATCCGGTAA GCGTTTGGAG TGTAGGTGGA AGCGCCCTCG CGACGATCTT TGACGCCGGT
CGACTCTCCA GTCAGGTTGC AGGGGCGGAA GCCCGCCGCG ACGCCAGCGC CTATGCCTAC
CGCCACACGG TTCTCAATGC CTTCTCCGAA GCTGAAAACG CACTGGAAGG CGTCAGCGAT
CTCACCGAGC AGCGTACGGC GGCTGAACGC CAACGCGTCG CCCTGCGCGA AGCGCTGCAT
CACGCGACCA GTCGCTATCG CGCAGGCTAC GCGTCATACC TTGAGCAACT AGACGCGCAA
CGGGGCCTGC TAAGCGCCGA ACTTGCGGTT GTGCAGTTGC AGGAAGCCCA GCTCAGCAAC
TCCCTCACTC TTTACCAAGC GCTTGGCGGC GGTTGGTCCC GCGGCGGTCG GCAGGCTGGC
CCGGACGAGT GA
|
|---|
| Protein sequence | MMRRLFSIVL CGLAVQGCAV GITPAPPAAR VTAPIAWRAP AAGGQPAVSP TWWDAFGDPE
LRHAVEAALL HNLDIAAAET RVREADALFV QAHSALVPTL TASVAVQDAQ ALNSLGRASD
SATAQPQLQI AYEVDLWRRL RQADASARAL LQASQYGRAA VALSIAGATA RGYIGLASLD
AQLQIARETL ASRDEALRLA TRRADNGVTS RLELTQARSE REGAAQRVPA LVLAVERQEN
GLRLLLGGLP GPVPRGAISS LTLPTVAPGL PSELLQRRPD ISQAEAQVRA ADAALAASKA
ALLPQVRLTG SVGELFVQHL DPVSVWSVGG SALATIFDAG RLSSQVAGAE ARRDASAYAY
RHTVLNAFSE AENALEGVSD LTEQRTAAER QRVALREALH HATSRYRAGY ASYLEQLDAQ
RGLLSAELAV VQLQEAQLSN SLTLYQALGG GWSRGGRQAG PDE
|
|---|
| |