Gene Caul_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5413 
Symbol 
ID5897217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp126060 
End bp127217 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID641550701 
Productintegrase catalytic region 
Protein accessionYP_001672187 
Protein GI167621679 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.694464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG AGAGATTGTC GATGCGCCGC ATACGCGACT TACTGAGATT GAAGTTCGAG 
AACGGCCTGA GCAGCCGGTT GATCGCGACC TCGCTGGGGA TCAGCAAGGG GTCGGTTGGC
GATTACCTGC AGCGGGCCCA AGTGGCGGGA CTGAGCTGGC CGCTGCCAGA CGACATGACC
GACACAGCCC TGGAGCGGCG GCTGTTCCCA GGCCCGCCAG CGCCGTCGGT TGTTCCACGT
TGCGAGCCCA ACTGGGCCCA GGTCGATCAG GAGCTTCGCC GCCCCGGTGT GACGCGGTCC
CTGCTCTGGC AAGAGTACCG GGCCGATCAT CCCGACGGCT ATGGCTATGC CTGGTTCTGC
CAACATTACG ACGCCTGGAA GCGCCGGGTG TCGCCGACCA TGCGCCAGAA CCATGCCGCC
GGGGAGAAGG TGTTCGTCGA CTTCGCCGGC GACACCATCG ATGTCATCGA CCCGCTGACC
GGCGTCGCCC AGGCCATGAA GCTGTTCGTC GCCGCACTGG GGGCCTCCAG TTACGTCTAT
TGCGAGGCCC GACCCAGCGA GGGGCTCGCC GACTGGATCG GCTGCCATGT TGGCATGTTC
GCCTTCTTCG GCGGCGTGAC GGCGATCATC GTCTGCGACA ACCTCAAATC GGGGGTGACC
AAGCCCGACC GCTACGAACC CGGGATCAAC CGCACCTATC AGGACATGGC CCGCCATTAC
GGGACCACGG TCATGCCGGC CCGGCCCTAC AAGCCACGGG ACAAGGCCAA GGTCGAACAA
TCGGTGCTGC TGGTCGAGCG CTGGGTGTTG GCGCGTCTGC GCAACCGGCG CCATGCCGCC
TGGACGCCAG CCAGGATCCT GGCCGCGGCC GAGAAGATCG GCCCGGCCAC CGCCGCCCTG
TCCCAGGCCA TCATGACCGA CAGGCCCCAT CCCGAGCAGG GCTTCCGCAC CTGTCTGGGG
ATACTGGCTC TGGAGAAGAC CTACGGCCCA GCGCGTCTGG AAGCGGCCTG CCAGCGCGGC
GATCAGATCA AGGCGCGCTC CGTCAGTTCC ATCCGCTCGA TCCTCAAGAC CGGACTGGAT
CGCGCCTTCC TGGAGCCCGA GCCCGATCCT CAACCCCTCA GCCACGGCAA CATCCGTGGC
CGGGCCTACT TCCACTGA
 
Protein sequence
MPTERLSMRR IRDLLRLKFE NGLSSRLIAT SLGISKGSVG DYLQRAQVAG LSWPLPDDMT 
DTALERRLFP GPPAPSVVPR CEPNWAQVDQ ELRRPGVTRS LLWQEYRADH PDGYGYAWFC
QHYDAWKRRV SPTMRQNHAA GEKVFVDFAG DTIDVIDPLT GVAQAMKLFV AALGASSYVY
CEARPSEGLA DWIGCHVGMF AFFGGVTAII VCDNLKSGVT KPDRYEPGIN RTYQDMARHY
GTTVMPARPY KPRDKAKVEQ SVLLVERWVL ARLRNRRHAA WTPARILAAA EKIGPATAAL
SQAIMTDRPH PEQGFRTCLG ILALEKTYGP ARLEAACQRG DQIKARSVSS IRSILKTGLD
RAFLEPEPDP QPLSHGNIRG RAYFH