Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5413 |
Symbol | |
ID | 5897217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 126060 |
End bp | 127217 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550701 |
Product | integrase catalytic region |
Protein accession | YP_001672187 |
Protein GI | 167621679 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.694464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCG AGAGATTGTC GATGCGCCGC ATACGCGACT TACTGAGATT GAAGTTCGAG AACGGCCTGA GCAGCCGGTT GATCGCGACC TCGCTGGGGA TCAGCAAGGG GTCGGTTGGC GATTACCTGC AGCGGGCCCA AGTGGCGGGA CTGAGCTGGC CGCTGCCAGA CGACATGACC GACACAGCCC TGGAGCGGCG GCTGTTCCCA GGCCCGCCAG CGCCGTCGGT TGTTCCACGT TGCGAGCCCA ACTGGGCCCA GGTCGATCAG GAGCTTCGCC GCCCCGGTGT GACGCGGTCC CTGCTCTGGC AAGAGTACCG GGCCGATCAT CCCGACGGCT ATGGCTATGC CTGGTTCTGC CAACATTACG ACGCCTGGAA GCGCCGGGTG TCGCCGACCA TGCGCCAGAA CCATGCCGCC GGGGAGAAGG TGTTCGTCGA CTTCGCCGGC GACACCATCG ATGTCATCGA CCCGCTGACC GGCGTCGCCC AGGCCATGAA GCTGTTCGTC GCCGCACTGG GGGCCTCCAG TTACGTCTAT TGCGAGGCCC GACCCAGCGA GGGGCTCGCC GACTGGATCG GCTGCCATGT TGGCATGTTC GCCTTCTTCG GCGGCGTGAC GGCGATCATC GTCTGCGACA ACCTCAAATC GGGGGTGACC AAGCCCGACC GCTACGAACC CGGGATCAAC CGCACCTATC AGGACATGGC CCGCCATTAC GGGACCACGG TCATGCCGGC CCGGCCCTAC AAGCCACGGG ACAAGGCCAA GGTCGAACAA TCGGTGCTGC TGGTCGAGCG CTGGGTGTTG GCGCGTCTGC GCAACCGGCG CCATGCCGCC TGGACGCCAG CCAGGATCCT GGCCGCGGCC GAGAAGATCG GCCCGGCCAC CGCCGCCCTG TCCCAGGCCA TCATGACCGA CAGGCCCCAT CCCGAGCAGG GCTTCCGCAC CTGTCTGGGG ATACTGGCTC TGGAGAAGAC CTACGGCCCA GCGCGTCTGG AAGCGGCCTG CCAGCGCGGC GATCAGATCA AGGCGCGCTC CGTCAGTTCC ATCCGCTCGA TCCTCAAGAC CGGACTGGAT CGCGCCTTCC TGGAGCCCGA GCCCGATCCT CAACCCCTCA GCCACGGCAA CATCCGTGGC CGGGCCTACT TCCACTGA
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Protein sequence | MPTERLSMRR IRDLLRLKFE NGLSSRLIAT SLGISKGSVG DYLQRAQVAG LSWPLPDDMT DTALERRLFP GPPAPSVVPR CEPNWAQVDQ ELRRPGVTRS LLWQEYRADH PDGYGYAWFC QHYDAWKRRV SPTMRQNHAA GEKVFVDFAG DTIDVIDPLT GVAQAMKLFV AALGASSYVY CEARPSEGLA DWIGCHVGMF AFFGGVTAII VCDNLKSGVT KPDRYEPGIN RTYQDMARHY GTTVMPARPY KPRDKAKVEQ SVLLVERWVL ARLRNRRHAA WTPARILAAA EKIGPATAAL SQAIMTDRPH PEQGFRTCLG ILALEKTYGP ARLEAACQRG DQIKARSVSS IRSILKTGLD RAFLEPEPDP QPLSHGNIRG RAYFH
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