Gene Caul_5303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5303 
Symbol 
ID5897107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp12992 
End bp14086 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content64% 
IMG OID641550596 
Productalcohol dehydrogenase 
Protein accessionYP_001672082 
Protein GI167621574 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.803168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.725419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCCCG CCAAGACCTT TGCGATGGTT CAGACGGCGC CGCGCACGCT TGAAATGCGT 
GACTTGCCGA TCCCCGATAT CGAAGCCGAC AGCGCGATTC TGAGGATCGA GGCCTGCGGG
ATCTGTGGCA GCGACTACGA GCAATTCGAG GGGGTTCTGA AAACGCCTAT GCCGGTGATC
CCCGGGCACG AGCCCGTAGG GATCATCGAG GCGATCGGTG ACAAGGCCGC GCGCCGTTGG
GGCGTCGATG TCGGCGATCG GGTCGCCGTC GAGACCATGC TGTCTTGTCA TAGCTGTGAC
ACCTGCTTGG GCGGCCGCTA CCACCTCTGC GCCGACCGGC AGATCTATTC CTACATTCCG
CTATCGAACA TGCCGGGGCT CTGGGGCGCC TATGCCCAGT ACATGTACCT CGCCCCCAAC
ACGATCGTTC ACAAGATGGA CAAGACCTTG CCGCCCGAGC TCGCGGTGAT GTTCAACCCG
CTGGGGGCCG GGTTCCGCTG GGCGGTGGAG ATCCCTCAGA CCCAGGTCGG CGACACTATC
GTCATACTGG GACCGGGCCA GCGCGGTCTG GCCAGCGTCA TCGCCGCGCG GCAGGCGGGT
GCTGGGAAGA TCATCGTGAC GGGCATGGCC GCCGACGCCC GCAAGCTCGA CCTCGCCCGG
ATCTTCGGGG CGCACCATAC GATCGATGTC CAGAACGAGA ACGCCATCGA ACGCATCAAA
GAACTCACCG GCGGGCGTGG CGCCGATGTC GTCGTGGAGG TGACCTCCTA CGCCACCGAC
CCAGTGCGCG AAGCCCTCAG CTATGTGCGT CCCGGCGGTA CGATCGTCCT GGCGGGGGTG
AAGGGCTTCA AGCCAATACC GGACTTTGTC TCAGACCTGA TCGTCTTCAA GGAGATCACC
ATCAAGGGGG CGATCGGCGT GACCTCGTCG GGATACCGAA AGGCCATCGA CCTGATCGAG
GCACGGTCGC TGCCACTTGA GCTGATGCAC ACTCACGACT TCGAGTTGAA GGACGCCGAA
CTGGCCATCC GGACGCTGGC GCGTCAGGTG ACCGGAGATG AGTCCATCCA CTCGTGCCTG
ATCCCGCCCA CCTAG
 
Protein sequence
MIPAKTFAMV QTAPRTLEMR DLPIPDIEAD SAILRIEACG ICGSDYEQFE GVLKTPMPVI 
PGHEPVGIIE AIGDKAARRW GVDVGDRVAV ETMLSCHSCD TCLGGRYHLC ADRQIYSYIP
LSNMPGLWGA YAQYMYLAPN TIVHKMDKTL PPELAVMFNP LGAGFRWAVE IPQTQVGDTI
VILGPGQRGL ASVIAARQAG AGKIIVTGMA ADARKLDLAR IFGAHHTIDV QNENAIERIK
ELTGGRGADV VVEVTSYATD PVREALSYVR PGGTIVLAGV KGFKPIPDFV SDLIVFKEIT
IKGAIGVTSS GYRKAIDLIE ARSLPLELMH THDFELKDAE LAIRTLARQV TGDESIHSCL
IPPT