Gene Caul_5299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5299 
Symbol 
ID5897209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp8986 
End bp10074 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID641550592 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001672078 
Protein GI167621570 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.797236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.678656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG GTCTTTCGAG CGAGCAGCGC ATGCTGCAGG ACGCCGTGGC CCGTTATCTC 
GCGGAGCAAT CCCCGCTGCG CCATGTGCGA GATATCGCCG CCGCCGCGAA GCCCTACAGC
CCCGATGTCG CGGCGGGCCT GGCGGATCTC GGCGTGCCGG GGGTTATCAT CCCCCCGGAA
TTCGGCGGGA TGGGCCTTGG CCTGCTGGAA GCGGCGCTGG TGGCCGAAAC GCTCGGCTTC
AGCGTCGCGC CGGCGCATTT CGCGGGCGCG CATGTGATGG CGCCGCTGGC GATCCTGCTC
GGCGGGTCGG ACAGCCAACA GCAGGCGTGG CTGCCGCAGC TGGCGACCGG GGCGGCGAGG
GCGGCCGTCG CAGTCAGCCA AGCCGTGGAG GTCCGGGACG GGGTCGGGGT TGTCGCCAGG
GACGGGTGGC TGGACGGGAC AGCATTGTTC GTGCTCGACG CTGCGGACGC CGACCTGTTC
GTGGTGGCGG ACACCACCGG CGCATTGCAC CTGGTCGCAG CCGACGCGCC CGGTCTCACG
CAGATTCCGC TGACGACCAT CGACAAGACC CGCTCAGTCG GCGAACTCCG GATGACGGGC
GTCAAGGCCG ATCCGTTGCC CGGCGGCGGC GGCCGGACCA CCCGCCGTAT CATCGACGCG
GGGCGCATTA TGCTGGCCGC CGACATCCTG GGCGCCGGCA CGGCTATGAT CGAACAGGCC
GTGGCCTACG CTGGCACGCG CGTGCAGTTT GGCCGGCCGA TTGGGTCCTT CCAGGCGGTC
AAGCACATGT GCGCCGAGAT GGCGGCGGCC CTTGAGCCCT GCCGCTCGCT GGTCTGGTAT
GCGGCGCACG CCTTTGACCA TGCACCTGAC GAATCGACCC TGATGGCATG CCACGCAAAA
TCACACCTCT CCGAGGTCGG CCGGTTCGTC GCGCGGACCT CCACCGAAGT GCACGGCGGC
ATGGGCTTCA CCGACCTCGC CGGGCTCCAC TACTGGTTCA AGCGCATCGG TCTGGATCGC
CAGCTGCTCG GAGGGCCGGA GCTCGTCCGC AACGAGGCCG CCCGCGTTCA GGGCTGGATC
GCCGCTTAG
 
Protein sequence
MEFGLSSEQR MLQDAVARYL AEQSPLRHVR DIAAAAKPYS PDVAAGLADL GVPGVIIPPE 
FGGMGLGLLE AALVAETLGF SVAPAHFAGA HVMAPLAILL GGSDSQQQAW LPQLATGAAR
AAVAVSQAVE VRDGVGVVAR DGWLDGTALF VLDAADADLF VVADTTGALH LVAADAPGLT
QIPLTTIDKT RSVGELRMTG VKADPLPGGG GRTTRRIIDA GRIMLAADIL GAGTAMIEQA
VAYAGTRVQF GRPIGSFQAV KHMCAEMAAA LEPCRSLVWY AAHAFDHAPD ESTLMACHAK
SHLSEVGRFV ARTSTEVHGG MGFTDLAGLH YWFKRIGLDR QLLGGPELVR NEAARVQGWI
AA