| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5083 |
|---|
| Symbol | |
|---|
| ID | 5897333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | - |
|---|
| Start bp | 3942 |
|---|
| End bp | 4415 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641555186 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001676517 |
|---|
| Protein GI | 167621732 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000803015 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0820919 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCA GAAACCGTGC GACGGTCCTG GCGCTGACGA CCGTCCTGGC CGGCGCGGGT
CACGCCGGCT CGGTTCAAGC CGCGTCGGAG GCTGTCTACT ATCGCCAACC GGAATCCGCC
CAGCCGTTCT CCGAGGCCGT GCGGGCCGGC GACCTGCTGA TCGTCTCCGG TCAGATCGGC
AAGGTGGCGG GCGCCACGCC CGAGGAGACC TTCGAGCGCT CGGCGCGCCA AGCCCTCGAC
CGCATCGGGC AGATCCTGGG CCGCCATGGC TCAGGGTTCG ACGATGTCGT CAAATGCACC
GTCATGCTGA CGGACATGAA GACCTGGCCA GCGTTCAACG CCGTCTATGC CAGCTACTTC
AAGCCCGATC GCCTGCCGGC GCGCAGCGCC TTTGGCGTCA CAAGCCTGGC GCGCGAGGCG
CCGTTGGAGG TCGAGTGCTG GGCCTATGCG CCGCTGGCGC CGGCCGGGCG CTGA
|
|---|
| Protein sequence | MTLRNRATVL ALTTVLAGAG HAGSVQAASE AVYYRQPESA QPFSEAVRAG DLLIVSGQIG
KVAGATPEET FERSARQALD RIGQILGRHG SGFDDVVKCT VMLTDMKTWP AFNAVYASYF
KPDRLPARSA FGVTSLAREA PLEVECWAYA PLAPAGR
|
|---|
| |