| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5064 |
|---|
| Symbol | |
|---|
| ID | 5902526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 5462782 |
|---|
| End bp | 5463597 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641565585 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001686682 |
|---|
| Protein GI | 167649019 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0351674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.360126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG ATTACGCATT CCCCAAGGGC GAACTGATGC GAGGCAAGAA GGGCCTCGTC
ATGGGCGTGG CCAATCATAA CTCCATCGCC TGGGGCATCG CCTCGCAGCT CGCCGCCCAG
GGCGCCGAGA TGGCGTTCAC CTATCAGGGC GAAGACCTGG AGCGCCGCGT GCGGCCGCTG
GCCGAGAGCA TCGGCGTCAC CACCATGATC CCGGCCGACG TCACCGATGA CGCTTCGATG
GACGCGGCCT TCGCCGCCAT TGAAGCCAAG TTCGGCGCGC TGGATTTCGT CGTCCACTCG
GTGGCCTTCG CCAACAAGAA CGAGCTGAAG GGCTCGTTCG TCGAGAACAC CACCCGCGAG
GGCTTCCTGA CGGCCCTGAA CATCTCGGCC TTCAGCTTCG TCGACGTCGC CAAGCGCGCG
TCGCGGATCA TGCCCAACGG CGGTTCGCTG ATCACCATGA CCTATCTGGG GTCGGAGCGG
ACCATCCCCA ACTACAACAC CATGGGCGTG GCCAAGGCGG CGCTGGAAGC CTGCACCCGC
TATATCGCCC GCGACCTCGG CCCCAAGGGC ATCCGGGTCA ACGCCATCTC GGCGGGCGCC
ATGCGCACCC TGTCGCTGGC CGGCATCTCG GGCGGCCGGG GCATGATCGC CCAGGGCCGC
GCCTTCAGCG CCATGAAGGA AGACACCTCG ATGGAAGGCG TCGCGGGCTG CGCCCTGTGG
CTGGCCTCGG ACCTGGGCCG CTCGACCACG GGCGAAGTCG TCCACGTCGA CGCCGGCTTC
CACATGATGG GCATGCCCGA CGAGGCCGAA GGGTGA
|
|---|
| Protein sequence | MADDYAFPKG ELMRGKKGLV MGVANHNSIA WGIASQLAAQ GAEMAFTYQG EDLERRVRPL
AESIGVTTMI PADVTDDASM DAAFAAIEAK FGALDFVVHS VAFANKNELK GSFVENTTRE
GFLTALNISA FSFVDVAKRA SRIMPNGGSL ITMTYLGSER TIPNYNTMGV AKAALEACTR
YIARDLGPKG IRVNAISAGA MRTLSLAGIS GGRGMIAQGR AFSAMKEDTS MEGVAGCALW
LASDLGRSTT GEVVHVDAGF HMMGMPDEAE G
|
|---|
| |