Gene Caul_4976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4976 
Symbol 
ID5902438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5380392 
End bp5381624 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content68% 
IMG OID641565497 
Producttryptophan synthase subunit beta 
Protein accessionYP_001686594 
Protein GI167648931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.986936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCC CAACAAACGT CTCTGGCAAG CCCAACGACT ATTCGGCCTA TCCCGACGCC 
AACGGCCGCT TCGGCGACTT CGGCGGCCGC TACGTGGCCG AGACCCTGAT GCCGCTGGTC
CTGGAACTGG GCGAGGCCTA TGCCGCCGCC AAGGCCGATC CGGCCTTCCA GGAACAGCTC
AAGAGCTTCA ACACCCACTA TGCCGGCCGG CCCAGCCCGC TCTATTTCGC CGAGCGCCTG
ACCGCGCACT TCGGCGGGGC CAAGATCTAT TTCAAGCGCG ACGAGCTGAA CCACACCGGC
TCGCACAAGA TCAACAACGC CCTGGGCCAG ATCCTGCTGG CCATGCGCAT GGGCAAGACC
CGGATCATCG CCGAGACCGG GGCCGGACAG CACGGCGTGG CCACCGCCAC CGTCTGCGCC
CGCTTCGGCC TGCCCTGCGT CGTCTACATG GGCGCCACCG ACGTCGAGCG TCAGAAGCCC
AACGTGTTCC GCATGAATCT CCTTGGGGCG GAAGTCCGTC CGGTGACCTC GGGCACCGGC
ACCCTGAAGG ACGCCATGAA CGAGGCGATG CGCGACTGGG TGACCAACGT GCACGACACC
TATTACCTGA TCGGCACGGC GGCCGGCCCC CACCCCTATC CGGTGATGGT CCGCGACTTC
CAGAGCGTGA TCGGCATCGA GGCCCGCGCC CAGATCCTGG AGATGGAAGG CCGTCTCCCC
GACGCCGTGG TGGCCTGCAT CGGCGGCGGC TCCAACGCCA TCGGCCTGTT CCACCCGTTC
CTGGCCGACG AGGGCGTGCG GCTGATCGGC GTCGAGGCGG CCGGCCTGGG CGTCTCCACC
GACAAGCACG CCGCCTCCCT GACCGGCGGC CGCCCGGGCG TGCTGCACGG CAACAAGACC
TACCTGCTGC AGGACGACGA CGGCCAGATC ATCGACGCCC ACTCGATCTC GGCCGGGCTC
GACTATCCCG GCATCGGCCC CGAGCACTCG TTCCTGCACG AGATCGGCCG CGCCGAATAT
GTCTCGGCCA CCGACGACGA GGCCCTGGCG GCCTTCCAGC TGTGCTCGAC CCTCGAAGGC
ATCATCCCGG CCCTGGAGCC GGCCCACGCC CTGGCCCGGG TGGGCGAGAT CGCCCAGTCG
CTGGGCAAGG ACAAGATCGT GGTGATGAAT CTGTGCGGCC GCGGCGACAA GGACATCTTC
ACGGTCGCCG CCGCGCTCGG CCGGACGATC TAG
 
Protein sequence
MNAPTNVSGK PNDYSAYPDA NGRFGDFGGR YVAETLMPLV LELGEAYAAA KADPAFQEQL 
KSFNTHYAGR PSPLYFAERL TAHFGGAKIY FKRDELNHTG SHKINNALGQ ILLAMRMGKT
RIIAETGAGQ HGVATATVCA RFGLPCVVYM GATDVERQKP NVFRMNLLGA EVRPVTSGTG
TLKDAMNEAM RDWVTNVHDT YYLIGTAAGP HPYPVMVRDF QSVIGIEARA QILEMEGRLP
DAVVACIGGG SNAIGLFHPF LADEGVRLIG VEAAGLGVST DKHAASLTGG RPGVLHGNKT
YLLQDDDGQI IDAHSISAGL DYPGIGPEHS FLHEIGRAEY VSATDDEALA AFQLCSTLEG
IIPALEPAHA LARVGEIAQS LGKDKIVVMN LCGRGDKDIF TVAAALGRTI