Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4751 |
Symbol | |
ID | 5902213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 5136028 |
End bp | 5138415 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641565270 |
Product | TonB-dependent receptor |
Protein accession | YP_001686369 |
Protein GI | 167648706 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0405819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTTG AGATCCATCG CCCGCGCGCG CGTCGCGCGC TGCTGGCCGC GACTTCGCTG GTCGCCGTCG TCGCCTTGCC CATGTTGGCC AGCGCCCAGG ATCGGTCGGA CACCGTCGAG GAGCTGATCG TCACCGCCAC CAAGCGCGAC GCGACCATTC TGGATGTGCC GTTCTCGATC AACGCCCAGA CCGAGGCCGA CATTCAGAAG TCTGGCGCGG TCACCCTCGA GGACCTGTCG CGCAACGTCG CGGGCCTGAC GATCCAGAAC CTCGGCCCCG GCCAGAGCCA AGTGTCGGTG CGCGGCGTCT CGGCCGGCCA GGTGGTCCGC GACCAGCCGG GCGTGAAGGA GCAGGTCGGG GTCTATCTCG ACGAGTCGGT GATCTCGCTG TCGCTGTTCA CCCCCGACAT CGACCTGTTC GACCTCAACC GGGTCGAGAC CTTGCGCGGC CCGCAGGGCA CGCTGTTCGG CTCCGGTTCG GTGGGCGGCA CGATCCGCTA CATCACCAAC CAGCCCGTGA TCGGCGACTA TAAGGGTACT GTCGAGGCCA ATCTCAACAC CCTGAAGGGC GGCGACGTGG GCGGCTACGT CAAGGGCGCG GTCAATATCC CCGTCTCGGA CAAGGTCGCG TTGCGGGCGG TCGGCTATGA CACCGAATAC GGCGGCTTCG TCGACGCCCT GGGCGAGGGC GGGACCAAGA AGAACAACGT CAACGACGGC TATCGTCGCG GCGGCCGGCT GTCGTTGCTG TTCAAGCCGA CCGACGACAT CAAGATCACC CCGCGCGTCG TCTATCAGAA GATCCACGCC GGCGGCTTCA ACCGCCAGGA AGCCTTCAAC CTGTTCGCCA ACCCCTACAC CACCACCCGG CCGGCGATCA CCCTGGGCGA GCGCCAGCAG TACCTGCTGC TCGACGAGAG CTTCGACGAC AAGACCTTCC TGGCCGACCT GACCGCCGCG TTCGCCTTCG ACGGCGTCGA ACTGACCTCG GTGACCAGCT ATATCGACCG CAAGATCGAC GTGAACCGCG ACGCCAGCGC CCTGACCGGC AGCGTCTCGG TGGACCTGGG CTTCCCGGCC GCCGCCGTCA CCTTGCCCTC GAAACTGGTC GACACCACGG ACCTGGAACA GTTCACCCAG GAAGTGCGCC TGGGCTCGCG AACCGACAGC CCGTTCCAGT GGGTGGTTGG CGCGTTCTAT TCCAAGGTCG ACCGGGTCTA TAACCAGCGC CTGCCGACGC CGGGCTACGA CGCCTATACC GACGCCACGC TGGGGGCCGG AACCTCGGCG CAAGTGGCCA ACGGCTTCCC GGCCAATTCG CCCTACAACG CGTCCCTGCC CTACAACATC AAGCAGAAGG CGGTGTTCGG CGAAGCCAGC TACGAGATCG ACAAGCTGAC CGTGACGGCC GGCGGCCGCT ATTACGACTT CAAGGAAAAC CGCCGCTTCA CGTCGGGCGG CCTGTTCGCC AATGGCGACG ACCAGACCGA CAAGACCTCG TCGGATGGCT TCACCCCGCG CCTGCTGGTC AGCTATAAGG CCAATCCGGG CCTGACCTTC AACGCCCAGG CGTCCAAGGG TTTCCGATTG GGCGGGGTCA ATGATCCGCT GAACATCCCC CTCTGCACCC CGCAGGACGC GGCGATCTTC GGCGGCTTCC AGTCCTATGA CGACGAGACG CTGTGGAACT ACGAGGGCGG GGTGAAGTCG CGGTTCGGCG GCGTCACCTT CAACGGCGCC GTGTTCTATA CCGACATCAA GAATCTGCAG ACGACGCTCG ACGCCGGCTC GTGTTCGTCG CGCGTGGTGT TCAACGTGCC CAAGGCCCAC ACCAAGGGCA TCGAGGGCGA GCTCACGGCC CACCCGGCGC CGGGCCTCCA ACTCGGCGTT TCGGGGAGCC TGCTGGAGGC CGAATTCGAC TCCACGGTGA GGGATGGCGC GGGCGCGGTG ATCGGCGGGA TCCGCGAGGG CAACCGCCTG CCCTCGGTGC CCAAGTTCCA AATCTCGATC AACGCCACCT ACACGCGGAC CCTGACGGCT GCCATGGACG GCTATGTCAC CGCGTCGTTC CAGCACGTCG GCAACCGCTA CACCCAGGCC AGCGACCAGG AGAATAATCC GCGCGCCTTC GTCTCCGGCT TGCCGTTCGG CGGGGCGACG GGAACCCAGG CCACGGTTCT AGACCTGCAA CTGCCCAGCT ACGACCTGGT CAATCTCAGC GCCGGCCTGC AGATGGACAG CGGCCTGGAC GTGATCGCCT ACGTCAACAA CGTGTTCGAC GAGAACCCGC TGCTGTCGTT CGACCGCGAA CGCGGCGGCC GGGCGCGCCT GGGCTATGCG ATCGGCCAGC CGCGCGTCAT CGGCCTGACG GTGCGGCAGT CGTTCTAG
|
Protein sequence | MRLEIHRPRA RRALLAATSL VAVVALPMLA SAQDRSDTVE ELIVTATKRD ATILDVPFSI NAQTEADIQK SGAVTLEDLS RNVAGLTIQN LGPGQSQVSV RGVSAGQVVR DQPGVKEQVG VYLDESVISL SLFTPDIDLF DLNRVETLRG PQGTLFGSGS VGGTIRYITN QPVIGDYKGT VEANLNTLKG GDVGGYVKGA VNIPVSDKVA LRAVGYDTEY GGFVDALGEG GTKKNNVNDG YRRGGRLSLL FKPTDDIKIT PRVVYQKIHA GGFNRQEAFN LFANPYTTTR PAITLGERQQ YLLLDESFDD KTFLADLTAA FAFDGVELTS VTSYIDRKID VNRDASALTG SVSVDLGFPA AAVTLPSKLV DTTDLEQFTQ EVRLGSRTDS PFQWVVGAFY SKVDRVYNQR LPTPGYDAYT DATLGAGTSA QVANGFPANS PYNASLPYNI KQKAVFGEAS YEIDKLTVTA GGRYYDFKEN RRFTSGGLFA NGDDQTDKTS SDGFTPRLLV SYKANPGLTF NAQASKGFRL GGVNDPLNIP LCTPQDAAIF GGFQSYDDET LWNYEGGVKS RFGGVTFNGA VFYTDIKNLQ TTLDAGSCSS RVVFNVPKAH TKGIEGELTA HPAPGLQLGV SGSLLEAEFD STVRDGAGAV IGGIREGNRL PSVPKFQISI NATYTRTLTA AMDGYVTASF QHVGNRYTQA SDQENNPRAF VSGLPFGGAT GTQATVLDLQ LPSYDLVNLS AGLQMDSGLD VIAYVNNVFD ENPLLSFDRE RGGRARLGYA IGQPRVIGLT VRQSF
|
| |