Gene Caul_4715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4715 
Symbol 
ID5902177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp5101031 
End bp5103364 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content69% 
IMG OID641565234 
Productalpha-1,2-mannosidase 
Protein accessionYP_001686333 
Protein GI167648670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3537] Putative alpha-1,2-mannosidase 
TIGRFAM ID[TIGR01180] alpha-1,2-mannosidase, putative 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.288424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTG GACTGGTGCT GGCCGCGATC GCGGCGCTGT CGACGGCTCC CGTCCTCGCT 
CAGGACAAGA CGCCCGCAAC CTCACCCTAC GACGCCGTCG ACCCGTTCAT CGGCACGGGC
GGCGACGGCC ACACCTTCCC AGGGGCGGTC GCGCCCTTCG GCATGGTCCA GCTGAGCCCC
GACACCGACA TCCTGCCGTT CAAGCAGAGC TACGCCCGCG CCGCCGGCTA TCGCTACAGC
GACCCGACGA TCCTGGGCTT CTCGCACACC CACTTCTCGG GCTCGGGCCA CTCCGACCTC
GGCGACATCC TGCTGGCCCC GGTCAGCGGC GAGGCCAAGC TGGAGCCCGG CGAGGCCGAC
AAGCCCGGCT CGGGCTACCG CTCGCGCTTC AGCCACGACG GCGAGATCGC CCAGCCCGGC
TACTACGCGG TGACCCTGAC CGACAGCCAG GTGCGCGCCG AGCTGACCGC CGGCCTGCGC
ACCGGCCTGC ACCGCTACAC CTACACCAAG GGCGCCCGAG CTCAGGTGCT GCTCGATCTG
CGGTCTTCGA TCTACAACTA CCCGGGCAAG GTCAGCTGGT CGCGGATCCG CGTCGCCGAG
GACGGCACGA TCACCGGGAT GCGCGAGACC CGCGGCTGGG CGCCGGGCCG CCAGCTCTAT
TTCGCCCTCC GCTTCGACCG GCCGCTGGTC GGCAAGGCGC TGTACAACAA GGAAGACGGC
GTCCCCTACA AGGGCTTCGC CCAGCCAGGC CGCACCGCCT TCGACCGCGC CCAGATCGAG
GGCCGGGCCC TGGTCGGGGT CTTCGATTTC GGGACGATCG ACGGGCCGCT GGTGGCCAAG
GTGGCGATCT CGTCGGTGAG CGAGGAGAAC GCCGTCCTGA ACCTCGACAG CGACGAAAAG
GGCTTTGACT TCGACGGCCT GCGGACCCGG ACCAAGGCCG ACTGGCAGAA GGCCCTGGGC
GCGGTCGAGA TCGCCGCCCC GGCCGCCACG CGGACGAACG TCTACACCGC GCTCTACCAC
ACCCTGCTGG CCCCCAGCGT GTTCAGCGAC GTCGACGGCC GCTATCGCGG GCCGGACAAC
GAGGTGCACC AGGCGAAAGG CTATACCTTC CACTCGACCT TTTCGCTGTG GGACACCTTC
CGCGCCGAGC ACCCGCTGCT GACCCTGGTC CAGCCCGAGC GGCGCACCAG CGACGTGGTC
AATTCCCTGA TCGCCTCGCA AGCCGAGAGC CCCTACGGCA TCCTGCCGGT CTGGCAGTTC
CACGGCCAGG AGACCTGGAC GATGATCGGC TACCACGCCG TGCCGGTGAT CGCCGACGCC
TACCTGAAGG GCATCCGGGG CTTCGACGAG AAGGCGGCCC TGGACGCCAT GGTCAGGAGC
GCCACCTACG CGCCCTACGG CGGCCTCGGC GACTACATGG CCCTCGGCTA CGTGCCGATC
GACAAGGAGC CGGAGGCCGC CTCCAAGACC GTCGAATACG CCTATGACGA CTGGACAATC
GCCCGCATGG CCAAGGCCAT GGGCCGCGCC GACGTCGCCG CTGCGTTCGA GAAGCGGGCC
GGCAACTGGC GCAACAGCTT CGACGTCAAG ACCGGCTTCC TGAGGGCCCG CAAGAGCGAC
GGGACCTACC GCACGCCGTT CGACCCGACC GCGATCAACT ACGGCAGCGA CTACACCGAG
GGCAACGCCT GGCAATATTC GTGGTTCGCG CCGCAAGACC TGGGCGGGAT CGTCGGGCTG
CTGGGCGGCG ACGCGGCGAC CGTGAAGAAG CTGGACGCCA TGTTCGACTT CGACAACTCC
AAGCTCGACT ACTCCCACGC CGAGGACATC GCCGGCCTGA TCGGCCAGTA CATCCACGGC
AACGAGCCCA GCCACCACGT GGCCTACATG TACGACTATG CCGGCGCCCC GTGGCGCACC
CAGGCCCGGC TGACCCAGAT CGTGAAGAGC CAGTACAAGC CCACGCCGAA CGGCCTGTCG
GGCAATGACG ACCTGGGCCA GATGTCGGCC TGGCTGGTGT TCACGTCGCT GGGCTTCTAC
CCGGTGACGC CGGGTTCCAA CGAATACGCG ATCGGCCGGC CGTTCGTGGA GCGGGCCGTG
CTGAACCTGG AGGGCGGCAA GCGGTTCACG GTGCGGGCGG TGGGACTGTC GGACAGCGCG
CCCTACGTCG GGGCGGTGAC GCTGAACGGC AAGCCGCTGA CGCGCAGCTT CCTCCGCGAC
GCCGAGATCC GGGCCGGCGG CGAACTGGTC TTCACGATGA GCGCCACGCC GAACAAGGGC
TGGGCGTCGG GGGCGAAGGA CCGGCCGTTG AGCATGACGG GGTATGGGAA ATAG
 
Protein sequence
MRLGLVLAAI AALSTAPVLA QDKTPATSPY DAVDPFIGTG GDGHTFPGAV APFGMVQLSP 
DTDILPFKQS YARAAGYRYS DPTILGFSHT HFSGSGHSDL GDILLAPVSG EAKLEPGEAD
KPGSGYRSRF SHDGEIAQPG YYAVTLTDSQ VRAELTAGLR TGLHRYTYTK GARAQVLLDL
RSSIYNYPGK VSWSRIRVAE DGTITGMRET RGWAPGRQLY FALRFDRPLV GKALYNKEDG
VPYKGFAQPG RTAFDRAQIE GRALVGVFDF GTIDGPLVAK VAISSVSEEN AVLNLDSDEK
GFDFDGLRTR TKADWQKALG AVEIAAPAAT RTNVYTALYH TLLAPSVFSD VDGRYRGPDN
EVHQAKGYTF HSTFSLWDTF RAEHPLLTLV QPERRTSDVV NSLIASQAES PYGILPVWQF
HGQETWTMIG YHAVPVIADA YLKGIRGFDE KAALDAMVRS ATYAPYGGLG DYMALGYVPI
DKEPEAASKT VEYAYDDWTI ARMAKAMGRA DVAAAFEKRA GNWRNSFDVK TGFLRARKSD
GTYRTPFDPT AINYGSDYTE GNAWQYSWFA PQDLGGIVGL LGGDAATVKK LDAMFDFDNS
KLDYSHAEDI AGLIGQYIHG NEPSHHVAYM YDYAGAPWRT QARLTQIVKS QYKPTPNGLS
GNDDLGQMSA WLVFTSLGFY PVTPGSNEYA IGRPFVERAV LNLEGGKRFT VRAVGLSDSA
PYVGAVTLNG KPLTRSFLRD AEIRAGGELV FTMSATPNKG WASGAKDRPL SMTGYGK