Gene Caul_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4211 
Symbol 
ID5901673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4577782 
End bp4578978 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID641564733 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001685833 
Protein GI167648170 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.342556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA TGGCTTGGCC CCGTTGGGCG CTGATGGCGG TGCTGCTGAT CGTCGTGGTG 
ATCGTCGTGA TCGTCCTGGC CGCGCCGCGC CCGGTGTCCG TGACGCTCGC TCCGGTTGGC
GTCGGACCCA TCGCCGATAG CGTCGCCGAT CAAGGCTATG CCCGCGTGCG GGAGGCCTAT
GTCGTCTCGG CCCCGGTTTC GGGACGGCTG CAACGCCTGG ACCTGCATGT CGGCGATCGC
GTCGAGAAGG GCGTGACCAT CATCGCGCGT ATCCTGCCGT CCGGAGCCGA GCTGCTCGAT
CCCAGGACCC GGGCCCAGGC GGAGGCCCGC GTCGCGGCCG CGAACGCGGC CGTCGCCAGC
GCTCGCGCGC AGCTGGACCA GTTGATGGCC GGCGCTCGAC AGTTGGAAGG CGATCTCGCC
CGCCAGCGTG AACTCGCCGT CAAGGGCTTC GCGGCGGCCC AGGCCCTCGA GGCCGTCGAG
AACAAGGCGC GCGCCGCGCG CGCCGGCGTC CGCGCCGCCC AGGCGGAATT GAGCGTGCGC
CGTTCGGAAC TCGGGGTCGC CCGCGCGGCC CTGATTGGAC CCGAGGGAGA AGGCCAGGGC
GTGGCTTCGG TCAGCGCCCC GGCCTCGGGC TATGTCACCC GTGTGCTGCA GGAGAGCGAG
CGCACCGTCG CCGTCGGCGC GCCGCTCGTC GAGGTCAGCG ACAAGGGCGG GCTGGAGGCG
GCGATCGAGT TCCTGTCCCA GGACGCGGTG AAGATTCGCG AGGGCATGGC CGCGGAAGTG
TTCGACTGGG GCGGTCCGGC GCTGCCCGCC ATCGTTCGCC GCGTCGAGCC GCAGGGCTTC
ACCAAGGTGT CGGCGCTGGG GGTCGAGGAG CAAAGGGTTC TCGTCTTCCT GCAGATGCGC
GGCGACCCGG CGGGCTGGGC GAGCCTTGGA CCCGGCTACC GGCTGTGGGG CAGGGTGTTC
CTGCGGCGGG CGCCCAGCGC CCTCAAAATA CCCCTGGGCG CCTTGGTGCG CCACGGCGGC
GGTTGGGCGG TGTTCAAGGC CGACGCTGGC CGGGCGCGCC TGACGCCGGT GGGCGTCGGG
GTGATGACCG ATCGCGAGGC CGAGATCCTC AAGGGTTTGC GCGCTCAGGA GCAGGTGGTG
GTGTTCCCCT CCGACCAGGT TCGTGACGGC GCCCGACTGA AGGTCCGGGC GAACTGA
 
Protein sequence
MGKMAWPRWA LMAVLLIVVV IVVIVLAAPR PVSVTLAPVG VGPIADSVAD QGYARVREAY 
VVSAPVSGRL QRLDLHVGDR VEKGVTIIAR ILPSGAELLD PRTRAQAEAR VAAANAAVAS
ARAQLDQLMA GARQLEGDLA RQRELAVKGF AAAQALEAVE NKARAARAGV RAAQAELSVR
RSELGVARAA LIGPEGEGQG VASVSAPASG YVTRVLQESE RTVAVGAPLV EVSDKGGLEA
AIEFLSQDAV KIREGMAAEV FDWGGPALPA IVRRVEPQGF TKVSALGVEE QRVLVFLQMR
GDPAGWASLG PGYRLWGRVF LRRAPSALKI PLGALVRHGG GWAVFKADAG RARLTPVGVG
VMTDREAEIL KGLRAQEQVV VFPSDQVRDG ARLKVRAN