Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4211 |
Symbol | |
ID | 5901673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4577782 |
End bp | 4578978 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641564733 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001685833 |
Protein GI | 167648170 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.342556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA TGGCTTGGCC CCGTTGGGCG CTGATGGCGG TGCTGCTGAT CGTCGTGGTG ATCGTCGTGA TCGTCCTGGC CGCGCCGCGC CCGGTGTCCG TGACGCTCGC TCCGGTTGGC GTCGGACCCA TCGCCGATAG CGTCGCCGAT CAAGGCTATG CCCGCGTGCG GGAGGCCTAT GTCGTCTCGG CCCCGGTTTC GGGACGGCTG CAACGCCTGG ACCTGCATGT CGGCGATCGC GTCGAGAAGG GCGTGACCAT CATCGCGCGT ATCCTGCCGT CCGGAGCCGA GCTGCTCGAT CCCAGGACCC GGGCCCAGGC GGAGGCCCGC GTCGCGGCCG CGAACGCGGC CGTCGCCAGC GCTCGCGCGC AGCTGGACCA GTTGATGGCC GGCGCTCGAC AGTTGGAAGG CGATCTCGCC CGCCAGCGTG AACTCGCCGT CAAGGGCTTC GCGGCGGCCC AGGCCCTCGA GGCCGTCGAG AACAAGGCGC GCGCCGCGCG CGCCGGCGTC CGCGCCGCCC AGGCGGAATT GAGCGTGCGC CGTTCGGAAC TCGGGGTCGC CCGCGCGGCC CTGATTGGAC CCGAGGGAGA AGGCCAGGGC GTGGCTTCGG TCAGCGCCCC GGCCTCGGGC TATGTCACCC GTGTGCTGCA GGAGAGCGAG CGCACCGTCG CCGTCGGCGC GCCGCTCGTC GAGGTCAGCG ACAAGGGCGG GCTGGAGGCG GCGATCGAGT TCCTGTCCCA GGACGCGGTG AAGATTCGCG AGGGCATGGC CGCGGAAGTG TTCGACTGGG GCGGTCCGGC GCTGCCCGCC ATCGTTCGCC GCGTCGAGCC GCAGGGCTTC ACCAAGGTGT CGGCGCTGGG GGTCGAGGAG CAAAGGGTTC TCGTCTTCCT GCAGATGCGC GGCGACCCGG CGGGCTGGGC GAGCCTTGGA CCCGGCTACC GGCTGTGGGG CAGGGTGTTC CTGCGGCGGG CGCCCAGCGC CCTCAAAATA CCCCTGGGCG CCTTGGTGCG CCACGGCGGC GGTTGGGCGG TGTTCAAGGC CGACGCTGGC CGGGCGCGCC TGACGCCGGT GGGCGTCGGG GTGATGACCG ATCGCGAGGC CGAGATCCTC AAGGGTTTGC GCGCTCAGGA GCAGGTGGTG GTGTTCCCCT CCGACCAGGT TCGTGACGGC GCCCGACTGA AGGTCCGGGC GAACTGA
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Protein sequence | MGKMAWPRWA LMAVLLIVVV IVVIVLAAPR PVSVTLAPVG VGPIADSVAD QGYARVREAY VVSAPVSGRL QRLDLHVGDR VEKGVTIIAR ILPSGAELLD PRTRAQAEAR VAAANAAVAS ARAQLDQLMA GARQLEGDLA RQRELAVKGF AAAQALEAVE NKARAARAGV RAAQAELSVR RSELGVARAA LIGPEGEGQG VASVSAPASG YVTRVLQESE RTVAVGAPLV EVSDKGGLEA AIEFLSQDAV KIREGMAAEV FDWGGPALPA IVRRVEPQGF TKVSALGVEE QRVLVFLQMR GDPAGWASLG PGYRLWGRVF LRRAPSALKI PLGALVRHGG GWAVFKADAG RARLTPVGVG VMTDREAEIL KGLRAQEQVV VFPSDQVRDG ARLKVRAN
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