| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4206 |
|---|
| Symbol | |
|---|
| ID | 5901668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4571343 |
|---|
| End bp | 4573229 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641564728 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_001685828 |
|---|
| Protein GI | 167648165 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACGATC AGCTTGATTC CACGTTCGAC CGGACTAACC CCGCCTCGGG TGCTTCGCTG
GAGGCGGCGC GCGAGGTTCT GCGTCGCACC TTCGGCCACT CGGACTTCCG AGGCTTGCAG
GCCGGGGTGA TCGGCGAGCT GCTGGCCGGG CGCAGCGCCC TGGCCGTGCT GCCGACCGGC
GGCGGCAAGA GCCTGTGCTA CCAGATCCCC GCCCTGGTGC GGCCGGGCCT GGGCCTGGTG
GTCTCGCCGC TGATCGCTCT GATGGCCGAC CAGGTGGCGG GCTTGCAGCA GGCCGGCGTC
GCGGCCGAGC GGCTGGACAG CAACACCCTG CCGGGCGAGC GGACCGAGAT CTGGCGGCGC
ATCGACGCCG GTACGCTGGA CCTGCTCTAT CTGTCGCCCG AGGGCCTGAT GCAGCCGTCG
ATGCTGGAGC GGCTGTCGCG CCTGCCCCTG TCGCTGGTCG CGGTCGACGA GGCCCATTGC
GTCAGCCAGT GGGGCCACGA CTTCCGGCCC GAATACCGCA TGCTGGGCCG CCTGGCCGAG
GTGTTCCCCA ACGCCCCGCG CCTGGCCGTC ACCGCCACCG CCGACGCCCG GACCCGCGAC
GACATCCGCG CCGAGCTGCG CCTGCAGGGC GCGGCCGAGT TCGTCGACAG CTTCGCCCGC
CACGAACTGG CCCTGAACGC CGAGCGCAAG AAGGGCAAGG GCCACGACCG GGTCATCGAG
CTGGTCACGG AACGGCCGAA CCGGGCCGGC GTGGTCTATG CCGGCAGCCG GGATTCCACC
GAGAAGCTGG CCGAAAAACT GATCGCCGAG GGCATCCCGG CGCTCGCCTA CCACGCCGGC
CTCGACAAGG GCGTGCGCGC CCGGCGGCTG GAAGAGTTCC TCGAGGCCGA CGAGGCGGTG
ATGGTCGCGA CCATCGCGTT CGGCATGGGG GTCGACAAGC CCGACGTCCG CTTCGTGATC
CACGCCGACC CGCCGGCCGC CATCGAGGCC TATTGGCAGG AGATCGGCCG AGCCGGCCGT
GATCGCCAGC CGGCCGAAGG CATCACCCTG TACAGCTCGG CGGATTTGGC CTGGGCCGTG
CGTCGCATCG AGGCCCAGAG CGCGCCCGAC GAGGTCAAGA CCGTGCAGCT GCGCAAGCTG
CGGCAGTTCT ACGCCATGCT CGAAGGCGTC ACCTGCCGCG CCGCCGCCGT CCGCCGCTAT
TTCGGCGAGG AGGGGGTCGA GCGCTGCGGG GTCTGCGACA TCTGCGTCTC GCCGCCGAAC
GGGATCGATG CGAGCCAGGC CGCCCAGAAG GCCCTGTCCG CGGCCCATCG CCTGGGCGGG
CGCTTTGGAC GCGGCCGGCT GGTCGACCAC CTGCTGGGCA AGACCAAGGA TGTCACGCCC
GCCGAGGCCC AGATGTCGAC CTTCGGCATC GGCAAGGAGT TCAGCCCCCA GGGCTGGCGC
GACCTGCTCG ACACCCTGGT GTTCGAGGGC CTGCTGCGCG AGGACCCCAA CGACGGCCGG
CCGCTGATCG GCCTGGGCGA TGGCGAGGGC GTGCGCCAGG TCTATCGCGG CGAACGCCTG
GTCTCGCTGC GCCAGCAGCC GACGCCCGCC GACAGCCCCG GCCGCTCTTC TGGAGGGGGC
GGGGCTGGCA AGACGGCCCG CAAGCGCCAA GCCTTGACCG TGCCGCTGGA GGACCAGGCT
CTGTTCGAGG CCCTGCGGTC CTGGCGGCGC GAGGAGGCGG CGCTGCAACA CGTTCCGCCC
TACGTGATCT TCCACGACGC CACCCTGGCC GAGATCGCCG CCGCGAGGCC GGCCACGGCG
GGCGCCCTGG CCAAGGCCGG CGGGGTGGGC CAAGGCAAGC TGGACCGGTA TGGCGAGGCC
GTGCTCAAAG TGGTGCGCGA CAACTAG
|
|---|
| Protein sequence | MYDQLDSTFD RTNPASGASL EAAREVLRRT FGHSDFRGLQ AGVIGELLAG RSALAVLPTG
GGKSLCYQIP ALVRPGLGLV VSPLIALMAD QVAGLQQAGV AAERLDSNTL PGERTEIWRR
IDAGTLDLLY LSPEGLMQPS MLERLSRLPL SLVAVDEAHC VSQWGHDFRP EYRMLGRLAE
VFPNAPRLAV TATADARTRD DIRAELRLQG AAEFVDSFAR HELALNAERK KGKGHDRVIE
LVTERPNRAG VVYAGSRDST EKLAEKLIAE GIPALAYHAG LDKGVRARRL EEFLEADEAV
MVATIAFGMG VDKPDVRFVI HADPPAAIEA YWQEIGRAGR DRQPAEGITL YSSADLAWAV
RRIEAQSAPD EVKTVQLRKL RQFYAMLEGV TCRAAAVRRY FGEEGVERCG VCDICVSPPN
GIDASQAAQK ALSAAHRLGG RFGRGRLVDH LLGKTKDVTP AEAQMSTFGI GKEFSPQGWR
DLLDTLVFEG LLREDPNDGR PLIGLGDGEG VRQVYRGERL VSLRQQPTPA DSPGRSSGGG
GAGKTARKRQ ALTVPLEDQA LFEALRSWRR EEAALQHVPP YVIFHDATLA EIAAARPATA
GALAKAGGVG QGKLDRYGEA VLKVVRDN
|
|---|
| |