Gene Caul_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4156 
Symbol 
ID5901618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4505874 
End bp4506554 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content73% 
IMG OID641564677 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001685778 
Protein GI167648115 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.082989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.582725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC GCCCCATCGC CCGCCGCGAC CTGCTGATCG GCGCCGGCCT GCTGGCCGCC 
TTCCCGGCCG CCGCCCAGGT CGCCCCCGCG CCCGCCGCGC CGACGCCCGC CCCCAAGCCT
CCGGTCTATG TTGCGCTGGA GACCCCGCAG GGCCGGATCG TCATCCAGCT GGCCGTCGCC
CAGGCTCCGA TCACCACCGC CAACTTCCTG CGCTATGTTG ATCGCAAGCT CTATGACAAG
GCGACCTTCT TCCGCGCCTC GCGGGCGCCG GGCGCGGTGG AGTACGGCCT GATCCAGGGC
GGACTGCAGA ACGTCGGCGC CCTGCCGCCG GTGGCCCACG AACCGACCAC CCAGACGGGC
CTCAAGCACA CCGACGGCGC GGTCTCGATC GCCCGCACCG CGCCGGGCAC CGCCACCTCC
GACTTCTTCA TCTGCGTCGG CGACGCGCCC TATCTGGACG CCAATCCGGC CGCCACCGGC
GACAATCTCG GCTTCGCCGC CTTCGGCCGG GTGGTCGAGG GCATGGACGT GGTCAAGAAG
ATCCTGGCCC TGCCCACCCC GGGCAAGGCG ATCAACCCGG TGATGAAGGG CCAGATCCTC
GACCCGCCGG TGCCGATCAC CTCGGCCCGC CGCGCGCCGG CCCCGACCGG CCCGGACATC
ACGGCGCCGC CGAAGCTCTA G
 
Protein sequence
MTHRPIARRD LLIGAGLLAA FPAAAQVAPA PAAPTPAPKP PVYVALETPQ GRIVIQLAVA 
QAPITTANFL RYVDRKLYDK ATFFRASRAP GAVEYGLIQG GLQNVGALPP VAHEPTTQTG
LKHTDGAVSI ARTAPGTATS DFFICVGDAP YLDANPAATG DNLGFAAFGR VVEGMDVVKK
ILALPTPGKA INPVMKGQIL DPPVPITSAR RAPAPTGPDI TAPPKL