Gene Caul_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4144 
Symbol 
ID5901606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4496669 
End bp4498612 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content71% 
IMG OID641564665 
Productcobalt chelatase, pCobT subunit 
Protein accessionYP_001685766 
Protein GI167648103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01651] cobaltochelatase, CobT subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.396726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.713122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCA AGCCCGAAAG CCCGATCGAA CCGTTCAAGC GCGCCCTGGC CCACGCGGCG 
CGCTCGCTCG CCGAGACCCC CGACCTCGAG GTGGTGTTCT CCGGCGAGGG GCCCAGCCTG
GTCGGCAACC GGGCGGTGCT GCCCCATCCG CCGCGCGACC TGAACCCCAA GGAGGCCGCC
CGCATCCGGG GCCTGGCCGA CCAGATGGCC CTGCGCCTGG CCCACCACGA CGCCGTCGCC
CACGCCCGAG CCCGGCCTAG CTCGCCCGAC GGCCAGGCGG CCTTCGAGGC CATCGAGCAG
GCTCGGCTGG AGGCGATCGG CAGCAACGCG CTCGGCGGCG TCCGCCAGAA CCTGACCGCC
GCGCTCGAAG CCCGTCTCGA AAAGCAGGGC CTGACCCGCG CCGTCGCCAC TGACCGCCAG
TCCGCGCCCA TGGCCGAGAT CCTGTCGCTG CTGGTGCGCG AGCGCCTGAC CGGCGACGCC
CCGCCCGAGG GCGCGAAAGC CCTGGTCGAC ATTCTGCGGG CCGACATCGA GAACCGGGCC
GGCAAGGACT TGGACCGCCT GGCCGCCGCC ATCGACGACC AGGCCGCCTT CGCCCGCGTC
ACCCGCGAGA TCCTGCGCGA TCTGGATCTT GGCGAGGAGA TGTCCGACGC CACCGAGCAG
TCCGACGAGG ATGAGGGTGA CGAGGACCAG AACACCGAGG CCTCGGAGGA CGATTCCGGC
GAAGGCGAGG GCGAGCAGGC CGACGGCGCC GCGCCTCAGG AGACCGAGAG CTCCGACCGC
GAGTCCGAGG CCGGCGACGA GGAGATGGTC CAGTCCGAGC AGGACGGCGA GGCCGAGGAC
ACCGAGGAAG CGCCGGAGAT GGGCGACGGC GCCAAGCCGG CGCGTCCCGA CCCCGGCAAG
GGCGGCGCGG GCGAACCGCC CTACAAGGTG TTCACCACGG CTTATGACGA GGTGGTGCCG
GCCGAGGAGC TGTGCGACGC CGACGAACTG ACCCGGCTGC GGGCCTATCT GGACCAGCAG
CTGGCGGCCT TCTCCAGCGT CGTCTCGCGC CTGGCCAACA AGCTGCAGCG CCGCCTGCTG
GCCCAGCAGA ACCGCTCGTG GACCTTCGAC CTGGAGGAGG GGATGCTCGA CGTCTCCCGC
CTCACGCGTG TCATCATCGA CCCCACCGCC CCGCTGTCGT TCAAGCAGGA GGAGGATGTC
GAGTTCCGCG ACACCGTCGT CACCCTGCTG ATCGACAATT CCGGCTCGAT GCGCGGGCGG
CCGATCATGG TGGCCGCCGT CTGCGCCGAC ATCCTGGCCC GCACCCTGGA GCGCTGCGCG
GTCAAGGTCG AGGTGCTGGG CTTCACCACC CGCGCCTGGA AGGGCGGCAC GGCCCGCGAC
GAGTGGATCA AGGCCGGCAA GCCGCCCGCG CCCGGCCGCC TGAACGACCT GCGCCACATC
ATCTACAAGA GCGCGGATGC GCCTTGGAGA AGGGCCCGCA AGAACCTGGG CCTGATGATG
CGCGAGGGGC TGCTGAAGGA AAACATCGAC GGCGAGGCCC TGATGTGGGC CCACCAGCGC
CTGATCGGCC GGCCCGAAGC CCGCCGCATT CTGATGGTGA TCTCCGATGG CGCGCCGGTG
GACGACTCCA CCCTCAGCGT CAATTCGGGC CACTATCTGG AGCGCCACTT GCGTCAGGTC
ATCGCCGAGA TCGAGACCCG CAGCCCGGTC GAGCTGATCG CCGTCGGCAT CGGCCACGAC
GTGACCCGCT ACTATCGCCG GGCCGTGACC ATCGTCGATG TCGAGCAACT GGGCGGCGCT
CTGGTCGACC AACTGGCCGA CCTGTTCGAC GAGGAGCCCA AGGCGGTGAA GCGGGCCAGG
GGCCTGCTGG CCGCACCGCC GACCGTGCAG CCCTCGGCCC CGCCAAAGTC TGGTCTTGGG
GCGTCGCGCA AGGTTCCCGC GTGA
 
Protein sequence
MASKPESPIE PFKRALAHAA RSLAETPDLE VVFSGEGPSL VGNRAVLPHP PRDLNPKEAA 
RIRGLADQMA LRLAHHDAVA HARARPSSPD GQAAFEAIEQ ARLEAIGSNA LGGVRQNLTA
ALEARLEKQG LTRAVATDRQ SAPMAEILSL LVRERLTGDA PPEGAKALVD ILRADIENRA
GKDLDRLAAA IDDQAAFARV TREILRDLDL GEEMSDATEQ SDEDEGDEDQ NTEASEDDSG
EGEGEQADGA APQETESSDR ESEAGDEEMV QSEQDGEAED TEEAPEMGDG AKPARPDPGK
GGAGEPPYKV FTTAYDEVVP AEELCDADEL TRLRAYLDQQ LAAFSSVVSR LANKLQRRLL
AQQNRSWTFD LEEGMLDVSR LTRVIIDPTA PLSFKQEEDV EFRDTVVTLL IDNSGSMRGR
PIMVAAVCAD ILARTLERCA VKVEVLGFTT RAWKGGTARD EWIKAGKPPA PGRLNDLRHI
IYKSADAPWR RARKNLGLMM REGLLKENID GEALMWAHQR LIGRPEARRI LMVISDGAPV
DDSTLSVNSG HYLERHLRQV IAEIETRSPV ELIAVGIGHD VTRYYRRAVT IVDVEQLGGA
LVDQLADLFD EEPKAVKRAR GLLAAPPTVQ PSAPPKSGLG ASRKVPA