| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4096 |
|---|
| Symbol | |
|---|
| ID | 5901558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4448853 |
|---|
| End bp | 4450148 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641564616 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001685718 |
|---|
| Protein GI | 167648055 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTG CTGACAGCTG GAATTGGCGG TCTCGACAAG GCGCCCTCGT CGCGGCCGGG
GCCGCTGCGG CGCTCGTCGT GGCCCTGGGC CTAGGGCTGA TGTCCCGTCA CGCCGCGCAG
TCCACTGTCC CCCAGCTCAG CTCGACCCTG CAGCCGCGCC CTTTCGCCGC CACGCTTGGC
TTGGTAGGCG CCATCGTGCC GGGCGACAGC GTCGATGTGG TCGCGCCCTT CGACGCGGTC
GTAAGGTCCG TCCACTTCGA ATACGGGGCC GCCGTCACAG CCGGCCAGAC CCTGGTCGAG
CTGGACGCCA GCGAGGTGAG CCAACGCCGC AACGAGGCCG AGGCCGGCTA CCTGAAAGCG
TCCAGGGCCG CCGAGGCGCT CGCGAACTGG AGCACGGGCG CCGAGGCGTC GCGCGCCCGC
CGCGCCGTGA ACACCGCCGC CTCCGACCTG AACGACATGG AGCGCAAGAT CCGCGAAGTC
AAAGGGCTGC TGGATCGAGG ATTGGTGGCG CGCGGCGAGT ACGATGGCCT GGTTCAACAG
CGCCGTGGCC AGGAAACCGC CCTGGCCGCC GCCCGGCAGG ATCTGGACGA GGTTCTGGCG
CGGGGCCAGG CCTCCAACCG CAGGGAAGCC GCACTTGACC TGCAGAACGC GCGCCTGCAG
CTGGCGCGCC TCAATGGCCA GATGGCGGGG GCCGTGGTGC GCGCGCCGAC CGACGGGATC
ATCGTGCGGC CGCCGGGCAA GGCCGAGGCC GCCGAGGCGG TCCACGCGGG CCAGGCGCTG
ACCCGGGGCC AGCTGATCGG CTCGATCGCT CGATCCGGCG GCCTGGCCGT GGCCTTCCAG
CTGAGCGAGA CCGACGCCAA CCGCGTGCGT CCAGGCATGG CCGTGACAGT CACCGGACCG
GGATTCGGCG ACATCGTGGC CTCGGGTCAT GTCAGCGCCG TCGCCGGAGA GGCCGCGCCA
ACGACGGCGG CTGGCGGCCC CTTGGCCAGT TTCCCGGCGG TTGCGCGACT GGACGGACTG
ACGCCGCGAC AGGCCGCGGC GGTGCGTATC GGCATGACCG CCAATGTCGT CGTGGACCTC
TATCGCAGCC CGGCGGCGCT GGTGGCGCCG ACCGCCGCCA TCCAGGGCGC CGCCCCGGCG
GCTTGGGTGA GGGTCAAGAA TCCGCATGGC GAAGGCTCGC GCGTGGTCCC GGTCAAGCTC
GGCCAATCCG CGCCCGACGG GATCGAGATC CTGGCGGGCC TCAAGGCGGG CGATGTGGTG
GTCTGGGACG CCCCCGCGGG CCCTGTCGCG CCATAG
|
|---|
| Protein sequence | MMRADSWNWR SRQGALVAAG AAAALVVALG LGLMSRHAAQ STVPQLSSTL QPRPFAATLG
LVGAIVPGDS VDVVAPFDAV VRSVHFEYGA AVTAGQTLVE LDASEVSQRR NEAEAGYLKA
SRAAEALANW STGAEASRAR RAVNTAASDL NDMERKIREV KGLLDRGLVA RGEYDGLVQQ
RRGQETALAA ARQDLDEVLA RGQASNRREA ALDLQNARLQ LARLNGQMAG AVVRAPTDGI
IVRPPGKAEA AEAVHAGQAL TRGQLIGSIA RSGGLAVAFQ LSETDANRVR PGMAVTVTGP
GFGDIVASGH VSAVAGEAAP TTAAGGPLAS FPAVARLDGL TPRQAAAVRI GMTANVVVDL
YRSPAALVAP TAAIQGAAPA AWVRVKNPHG EGSRVVPVKL GQSAPDGIEI LAGLKAGDVV
VWDAPAGPVA P
|
|---|
| |