| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3998 |
|---|
| Symbol | |
|---|
| ID | 5901460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4328036 |
|---|
| End bp | 4328926 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641564519 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001685621 |
|---|
| Protein GI | 167647958 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTAT TCCTCACCGG CGCGACCGGC TTCATCGGCT CGGCCATCGT TCCCGAACTC
CTCAAGGCGG GCCATCAGGT GCTGGGGCTG ACGCGGTCGG ACGCCGGCGC CCAGGCGCTG
AGCGCCGCGG GCGCGGAGGC CCATCGTGGC AGCCTGGAGG ACCTGGACAG CCTGCGCGCC
GGCGCGGCCC AGGCCGACGG CGTCATCCAC TGCGCCTTCG ACCACGACTT TTCCAACTTC
CTGGCCAATT GCGAGAAGGA CAAGCGCGCC ATCGAGGCCC TGGCCTCGGC GCTGGTGGGG
ACGGACCGTC CGCTGGTCAT CACCTCGGGC GTCGGCATGG GAAGCCCCGG CCCTGGCCAG
CCGGCGACCG AGGACGTCTT CAACCTCGAC CATCCCAATC CCCGCAGCGC CTCGGAGATC
GCCGGCAACG CGGCCCTGGC GACCGGCGTC AACGTGTCGG TCATGCGCCT TCCCCAGGTT
CACGACCCGG TCAAGCAGGG GCTGATCACG CCTTCGGTGG AGATCGCGCG CGCCAAGGGG
GTCTCGGCCT ATGTGGGCGA CGGCGCCAAC CGCTGGGCGG CCGCCCACGT GCTGGACGTC
GCGCGCCTCT ATCCGCTGGC GCTGGAGCGG GCGCAGCCGG GCGCCCGCTA CAACGCGGTG
GCCGAGGAAG GCGTGTCGGC CCGCGAGATC GCCGAAGTCG TCGGCGCGGG CCTGAGGGTT
CCCGTCGTCT CCCTGACCCC GGAAGAAGCC GCGGGCCATT TCGGCTGGTT CGCGATGTTC
GCGGGCCTGG ACATGCCGGC CTCCAGCGCC TGGACGCGGG AGACGTTGGG CTGGACCCCC
ACGGGCCCTG GCCTGATCGC CGATCTCAAG GCGATGGATT ACGGGGTGTA G
|
|---|
| Protein sequence | MRVFLTGATG FIGSAIVPEL LKAGHQVLGL TRSDAGAQAL SAAGAEAHRG SLEDLDSLRA
GAAQADGVIH CAFDHDFSNF LANCEKDKRA IEALASALVG TDRPLVITSG VGMGSPGPGQ
PATEDVFNLD HPNPRSASEI AGNAALATGV NVSVMRLPQV HDPVKQGLIT PSVEIARAKG
VSAYVGDGAN RWAAAHVLDV ARLYPLALER AQPGARYNAV AEEGVSAREI AEVVGAGLRV
PVVSLTPEEA AGHFGWFAMF AGLDMPASSA WTRETLGWTP TGPGLIADLK AMDYGV
|
|---|
| |