Gene Caul_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3876 
Symbol 
ID5901338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4196404 
End bp4197045 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID641564398 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001685500 
Protein GI167647837 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGT CGGTGAAGCG GGCGGTCAAG AGCAAGCGCC CCTCCAGGAC ACAGGACAAC 
CTGGTCTATG CCGCCGTCTG GCTGGCCTGC TTCGCGCCAC TGGTCTGGCT GGCCTGGCGG
GGGTTCAGCG GCGACCTGGG GGCTAATCCG ATCGAGACCC TGATCCGCCA GATCGGCGTC
TGGGGCCTGC GGCTGCTGCT GGTCGGCCTG GCCGTGACCC CGGCGGCGCG GATCCTGAAG
AGGCCGCGCC TGATCCGCTT CCGGCGCACC ATCGGCCTGT TCGCCTTCAG CTACATCTGC
CTGCACCTGC TGACCTATAT TGGCGTCGAC CTGTTCTTCG ACTGGGGCCA GCTGTGGAAG
GACATCCTCA AGCGGCCGTT CATCACCCTG GGCATGCTGG GCTTCGCCCT GCTGGTCCCG
CTGGCGCTGA CCTCGACCAA CGGCATGATC CGGCGCCTGG GGCGGGCGAG CTGGCAACGG
CTGCACTGGC TGATCTACCT GATCGTGCCG CTGGGCGTGG CCCACTACTA CCTGCTGGTG
AAGGCCGACC ACCGGCCGCC GTTGGTCTAT GCGGTGATCC TGACGGTGCT GATGGGGTGG
CGGGTGTGGG ACGCTTGGCA AAGACAAACG TCGCGGGCCT GA
 
Protein sequence
MDASVKRAVK SKRPSRTQDN LVYAAVWLAC FAPLVWLAWR GFSGDLGANP IETLIRQIGV 
WGLRLLLVGL AVTPAARILK RPRLIRFRRT IGLFAFSYIC LHLLTYIGVD LFFDWGQLWK
DILKRPFITL GMLGFALLVP LALTSTNGMI RRLGRASWQR LHWLIYLIVP LGVAHYYLLV
KADHRPPLVY AVILTVLMGW RVWDAWQRQT SRA