| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3851 |
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| Symbol | |
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| ID | 5901313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4166515 |
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| End bp | 4167165 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641564373 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001685475 |
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| Protein GI | 167647812 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00660482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.519144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGACC AGATCAATCC CGCCCCACGC CTCGACAACC AGGACCCCGG CCTGTTCGGC
CAGACGCCGT GGCAGACCGT GGGTCCCTTC TTCCACTACG GCCTGGCCTG GAAGGGCGGC
GCCGACCTGG TCGGCGTCTC CGAGATCGGC GCCCGGCCGG AGCTGTTTCC CGAAAACCAC
TATGTGCTGA ACCAACCTTC GCCCAAGGGC GCGATCGAGG GTGAGGTCAT CACGCTGGAG
GGCGCGGTGC TGGACGCCGC CGGCGCGCCG ATCGTCGACG CCATGATCGA GATCTGGCAG
GCCGACGCCG CGGGGCGCTA TGCCGACGGA AGCGGCAACA CCGGCTTCAT CGGCTTTGGC
CGGTCCTCGA CCGACGAAAG CGGCGTCTAT CGCTTTCGAA CGATCCGTCC GGGCCGGGTG
GACGACACCC AGGCCCCGCA CATCGCCATC GGCGTGTTTG GCCGCGGCTT GCTCAAGCGT
CTCGTCACCC GCGCCTATTT CGAGGGCGAA GCGGCCAATG CCGGCGACCC GATCCTGGCC
CTGGTTCCGG CGGAGCGCCG CGACACCCTG ATCGCCAAGC CCGTCGGCGA GACCTGGCGC
TTCGACATCG TCTTGCAAGG CGAGGCCGAA ACCGTCTTCT TCGACATCTG A
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| Protein sequence | MTDQINPAPR LDNQDPGLFG QTPWQTVGPF FHYGLAWKGG ADLVGVSEIG ARPELFPENH
YVLNQPSPKG AIEGEVITLE GAVLDAAGAP IVDAMIEIWQ ADAAGRYADG SGNTGFIGFG
RSSTDESGVY RFRTIRPGRV DDTQAPHIAI GVFGRGLLKR LVTRAYFEGE AANAGDPILA
LVPAERRDTL IAKPVGETWR FDIVLQGEAE TVFFDI
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