| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3840 |
|---|
| Symbol | |
|---|
| ID | 5901302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4159031 |
|---|
| End bp | 4159705 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641564362 |
|---|
| Product | anti-ECFsigma factor, ChrR |
|---|
| Protein accession | YP_001685464 |
|---|
| Protein GI | 167647801 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3806] Anti-sigma factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA ATGCAAATTT CCACCTCCGC GCGGTAGCTC ATACCGAATT GTTGCCATGG
GTCCCTTCGC CGATGGCGGG TGTTGAGAGG CGTATGCTCG ATCGCATTGG CGGCGAGGTT
GCCCGCGCTA CGACCGTCGT TCGTTACGCA CCAAACAGCC AGTTTTCGGC GCATCTGCAC
GGCGGCGGAG AAGAATTCTT AGTTCTGGAG GGGGTCTTCC AGGACGAGCA TGGCGACTAC
CCGGTCGGAA CTTACATTCG TAATCCTCCT CAATCCTCCC ATAAGCCCGG CACGGTGGAC
GGGGCCATTA TCCTGGTGAA GCTTTGGCAA TTTGACGCGG GCGACCAGAC GCGCGTGCGG
GTCGACACGC TTACAGCAAC ACCTGTTCGC TTGAGCGAAG GCGTTCAAAG TATTCCTCTG
CACAGCGACG ATCGGGAGAC CGTCCGCTTG GAGTTCTGGA GCCCCCACAT GCCGATCGAA
ATCCGCGCCC ACGACGGATT GGAGGTCTTT GTGCTTCAGG GACAGTTCCA AGAGGGCGCC
GAGAGTTTCA CGCGCCATTC CTGGCTTCGG CTCCCGGTGG GTCACGACTT CTTGGCGATG
ACCGGCTCTG AAGGGGCGAG GGTTTGGATC AAAAGCGGTC ATCTCTCGAT CGATCCCGCT
ATTTCAAACG TATAG
|
|---|
| Protein sequence | MNINANFHLR AVAHTELLPW VPSPMAGVER RMLDRIGGEV ARATTVVRYA PNSQFSAHLH
GGGEEFLVLE GVFQDEHGDY PVGTYIRNPP QSSHKPGTVD GAIILVKLWQ FDAGDQTRVR
VDTLTATPVR LSEGVQSIPL HSDDRETVRL EFWSPHMPIE IRAHDGLEVF VLQGQFQEGA
ESFTRHSWLR LPVGHDFLAM TGSEGARVWI KSGHLSIDPA ISNV
|
|---|
| |