Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3838 |
Symbol | |
ID | 5901300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4156833 |
End bp | 4157816 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641564360 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001685462 |
Protein GI | 167647799 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.204635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCTTTGC CCAGATGGCA TCGACAATGG GGGTTGGAAA AGTTTATGCC GGATATAGCG CTTGATTTGC GATATCTCAG ATATGCGATC ATTGTCGCTG AGCACGGCAG TCTTCGGCGG GCCGCCGAAG CTATGAATAT CTCCCAGTCT ACAGTTACGC GCCGAATCCA GTTGCTTGAA CGTCGCCTTG GTGCCCCATT ATTCGAGAGA AGCCGAAGCG GCACCCGTTT GACTTATGCC GGCGAAAATT TCATCCGCGA TGCTAAAGTC GGCGCTTCAC ATTTGCATCA GGCGATCAAC GACCTCACGC ATACCCAAAG AGGTAATCGC GGAGAGTTGC GCATCGGTTT GATGGCATCT TTGGCGAGCG GATTCTTATC TGAGTTGTTG GGTACTTTCC GAAAGCGGTT TCCAAGCGTT GATGTCAAGC TTGAAGAGGC GTCATCGCAA TCCAACGCTG CGGGAGTTCT GAGTGGACGA CTGGATGCAG CCTTCATCTC AGGTGCGCCT GAACTGCCAG GATGTGAGAC GCGATGCCTT TGGAGCGAGC GAATATTTCT GGCGCTGCCG GCGCAGCACC CGCTTGCCGC GCGCCAAAAC ATTGCATGGG AAGAGGTGCG CGACGAGACT TTCCTCGTGG GCGCTGAGGG GCCAGGTCCG GAAATAGAGG ACTATCTGGT CCGGCGGCTT TCCGATCTGG GATTTCGGCC AAAAATCCTC GTTCAGAAAG TGGGACGAGA CAACCTGCTC AACATGGTAG CGAAGGGCTT TGGGATGACC CTAACCACCG ATTCTACGTT GGGGACATCC TATGTGGGCA TCTCATTCGT TTCAGTGGGG GACGCTACCG AATGCGTCAG ATCCAGCGCC GTGTGGCTGA TCGGTAGCCA AAACCCGGCC TTACGGCGTT TGCTCGATCT GTGCGAAGTC ATGACTTCGC GACCGATCAG GCAGCGAAAT GAGCTATCCG ATCCGGCCCC GTGA
|
Protein sequence | MPLPRWHRQW GLEKFMPDIA LDLRYLRYAI IVAEHGSLRR AAEAMNISQS TVTRRIQLLE RRLGAPLFER SRSGTRLTYA GENFIRDAKV GASHLHQAIN DLTHTQRGNR GELRIGLMAS LASGFLSELL GTFRKRFPSV DVKLEEASSQ SNAAGVLSGR LDAAFISGAP ELPGCETRCL WSERIFLALP AQHPLAARQN IAWEEVRDET FLVGAEGPGP EIEDYLVRRL SDLGFRPKIL VQKVGRDNLL NMVAKGFGMT LTTDSTLGTS YVGISFVSVG DATECVRSSA VWLIGSQNPA LRRLLDLCEV MTSRPIRQRN ELSDPAP
|
| |