Gene Caul_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3706 
Symbol 
ID5901162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4001577 
End bp4002887 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content69% 
IMG OID641564217 
ProductSerine--pyruvate transaminase 
Protein accessionYP_001685331 
Protein GI167647668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.873168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTCCG ACGCCCCAGT AGCCCTCATC CTGAGCTTGT CGAAGGACGA GGGCGGCCCC 
ACGACCGCGC TCCATGAAGA CCACCGCATG ACCAACACCT TCGGCGAACT CGACCACCCG
CCCCGCCTGC TGATGGGTCC CGGCCCGATC AACGTGCACC CGCGCGTGCT GCGGGCCATG
TCGGTGCAGC TTCTCGGCCA GTTCGACCCC GAATTCACCG GCTACATGAA CGAGACCATG
GCGCTGTACC GCCAGGTGTT CCAGACGCAG AACCGCTGGA CCTTCCTGAT CGACGGCACC
TCGCGCGCCG CGATCGAGGC GGCGCTGGTC TCGACCCTGG CCCCGGGCGA CGACGTGGTG
GTGGTCAACG CCGGACGTTT CGGCCTGCTG CTGTCGGAGA TCGCCGAGCG CTGCGACGCC
AAGGTCACCC TGGTCGAGGG CGAGTGGGGC AAGGTCGTCG ATCCGCAGGC CGTCGAGGAC
GCGGTCAAGC GCGTGCGCCC GCGCCTGGTG GCCTGCGTGC ACGGCGACAC CTCCACCACC
ATGGCCCAGC CGATCGAGGC GATCGGCGAG ATCTGCCGCC GTTACGACGC CCTGCTCTAT
GTCGACGCCA CCGCCACGAT CGGCGGCATG AGCGTACCGG TCGACGCCTG GCAGGCCGAC
ATCGTCACCG GCGGGCTGCA GAAGTGCCTG GGCGGGCCAT CGGGCTCGGG ACCGATCACC
ATTTCTGACC GCGCCGCCGA GCACATCGCC AGCCGCAAGC ACGTCGAGGC CGGCATCGCC
ACGGCCGGGA CGGTCAGCGG CAATGGCCGC CGCATCGCCT CCAACTATTT CGACCTGGCG
ATGATCATGG ACTACTGGTC CGACAAGCGC CTGAACCACC ACACCGAAGC CGCCTCGATG
CTCTACGCGG CCCGCGAATG CGCTCGGGTG GTGTTGGAGG AAGGCCTGGA AGCCCGCTTC
GCCCGCCACG CCCAGGCCGG AGCCGCCGTG GTGGCCGGGG TCGAGGCGCT GGGGCTGAGC
GTCTATGGCG ACAAGGCCCA CAAGATGACC AACGTCACGG GCGTTTGGAT TCCGGCCGGG
ATCGACGGCG ACCGGGTTCG GATGCGGATG CGCACTGACT TCGAGATCGA GATCGGCACG
GCGTTCGGCC CGCTGACCGG CAAGATCTGG CGGATCGGGG CGATGGGGAT GAATGCGCGG
AAGCACGCGG TGCTGACGAC GCTGGCGGCG CTGGAAGCGG TGTTGCGCGG CGAGGGCTAT
GGGTTCACGG CGGGCGCTGG GGTGGATGCG GCGTTGGGGG TCTTTTCGTG A
 
Protein sequence
MISDAPVALI LSLSKDEGGP TTALHEDHRM TNTFGELDHP PRLLMGPGPI NVHPRVLRAM 
SVQLLGQFDP EFTGYMNETM ALYRQVFQTQ NRWTFLIDGT SRAAIEAALV STLAPGDDVV
VVNAGRFGLL LSEIAERCDA KVTLVEGEWG KVVDPQAVED AVKRVRPRLV ACVHGDTSTT
MAQPIEAIGE ICRRYDALLY VDATATIGGM SVPVDAWQAD IVTGGLQKCL GGPSGSGPIT
ISDRAAEHIA SRKHVEAGIA TAGTVSGNGR RIASNYFDLA MIMDYWSDKR LNHHTEAASM
LYAARECARV VLEEGLEARF ARHAQAGAAV VAGVEALGLS VYGDKAHKMT NVTGVWIPAG
IDGDRVRMRM RTDFEIEIGT AFGPLTGKIW RIGAMGMNAR KHAVLTTLAA LEAVLRGEGY
GFTAGAGVDA ALGVFS