| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3416 |
|---|
| Symbol | |
|---|
| ID | 5900871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3690379 |
|---|
| End bp | 3691146 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641563922 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_001685041 |
|---|
| Protein GI | 167647378 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.196922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CCCCCTCCTC CCCACTCCCC GCCGCCAGCG ACGCCCGGCG TGAGCTGGGC
GAGATCGTCC GCACCGCCGG CCTTGGCCTC GCCATCGCCC TGGCCTTGCG GATCCTCGTC
TTCCAGCCCT TCACCATTCC CTCGTCCTCG ATGGAGCCCG GGCTCGTCAC CGGCGACTAC
ATCGTGGTGT CCAAGCTGGC CTATGGCTGG AGCCGCGCGT CCTTCCCCCT GAACCCGCCG
CTGTTCCACG GGCGCCTGCT GGGCCGCACG GCCGAGCGGG GTGACGTGGT CGTCTTCCGG
CTGCCGCGCG ATCCCGACCA GACCTGGATC AAGCGCGTGG TCGGCCTGCC GGGCGACCGG
ATCCAGGTCC GTGGCGGCCA GGTCTTCGTC AACGGTCAAG CCCTGCCGCG GACGCCGGCC
AGCCTGACGC GGGACCACGA CGCGCCGGAG CGGCGAGTGC TCGCGATCGG CGAACGCGCC
CCCAACGGCC ACGCCTACGT CACCTATGAC GGCGGCCCCG ACCAGCCCGG CGACGACACC
GACGTCTATG TCGTGCCGGC GGGGCGGTAC TTCGTGATGG GCGACAACCG CGACAACTCG
CTGGACAGTC GCTGGCCGCG CGAAGCGGGC GTGGGCCTGC TGCCCGCCGA GAACCTGGTG
GGCAAGGCAA GGTTCGTCCT GGCGTCCTGG CGGCCGGGCG CCGCGATCTT CAAGCCCTGG
ACGTGGCTGA ACCTGCAGGT CGACCGCCTG TTCAAGCCAA TCCGCTAG
|
|---|
| Protein sequence | MTETPSSPLP AASDARRELG EIVRTAGLGL AIALALRILV FQPFTIPSSS MEPGLVTGDY
IVVSKLAYGW SRASFPLNPP LFHGRLLGRT AERGDVVVFR LPRDPDQTWI KRVVGLPGDR
IQVRGGQVFV NGQALPRTPA SLTRDHDAPE RRVLAIGERA PNGHAYVTYD GGPDQPGDDT
DVYVVPAGRY FVMGDNRDNS LDSRWPREAG VGLLPAENLV GKARFVLASW RPGAAIFKPW
TWLNLQVDRL FKPIR
|
|---|
| |