Gene Caul_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3345 
Symbol 
ID5900800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3625106 
End bp3625951 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID641563851 
ProductHflC protein 
Protein accessionYP_001684970 
Protein GI167647307 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.402019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC TGAGCGGCAA GACCATCGTC GCCGGGGTCG CGGCCCTGAG CCTGGTGATC 
CTGGCCAACG TCACCCTCTA CAAGATCGAC CAGCGCCAGC AGGCCCTCGT CGTCCGGTTC
GGCGATCCCG TCCGTACGGT GCTGACGCCC GGCCTGCACT TCAAGACGCC CTTCGAGACG
GTGCTGAAGT TCGACAAGCG CAACATCGAG CTCAACGCCA ACGAGGAAGA GGTCACCGCC
GCCGACCAGG AGCGCCTGGT GGTCGACGCC TTCGTCCGCT ACCGCATCAC CGATCCGCGC
CAGTTCTACC GGACGCTGGG TACGGTGGAC GTCGCCAAGC AACGGCTGGA AACCATCGTC
AACGCCGCCC TGCGCGAGGA GATCGGTCGC TCGAACTCCG AGGACGTGAT CGCCGGCAAG
CGGGCCCAGG TGATGGCCGC CATCCGGACC AAGGTCGCCA ACCAAGTGGC CGCCTCCGAC
CTTGGCGTGC AGATCATCGA CGTGCGGATC AAGCGCGCCG ACCTGCCGCC GGCCAACGAG
CAGGCGGTGT TCGAGCGCAT GCAGACCGCC CGCAAGCAGG AGGCCGCCGA ACTGCGGGCC
ATGGGCGAGC AGAAGCGTCG CGAGATCGTC GCCACCGCTT ACGAGGAGGC CGAGACCATC
CGCGGCGACG CCGACGCCCA GCGCGCCCAG ATGTTCGCGT CCAGCTTCGG CCGGGACCCC
AGCTTCGCCG CCTTCTACCG TTCGATGTCG GCGTATGAAG CCGCCCTGGG CAAGGGCGAC
ACCACCCTGG TGCTCTCGCC CGACAGCGCG TTCTTCAAGT ATTTCGACAA GGGTCCGGCG
GGGTGA
 
Protein sequence
MSNLSGKTIV AGVAALSLVI LANVTLYKID QRQQALVVRF GDPVRTVLTP GLHFKTPFET 
VLKFDKRNIE LNANEEEVTA ADQERLVVDA FVRYRITDPR QFYRTLGTVD VAKQRLETIV
NAALREEIGR SNSEDVIAGK RAQVMAAIRT KVANQVAASD LGVQIIDVRI KRADLPPANE
QAVFERMQTA RKQEAAELRA MGEQKRREIV ATAYEEAETI RGDADAQRAQ MFASSFGRDP
SFAAFYRSMS AYEAALGKGD TTLVLSPDSA FFKYFDKGPA G