| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3330 |
|---|
| Symbol | |
|---|
| ID | 5900785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3610243 |
|---|
| End bp | 3610830 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641563836 |
|---|
| Product | uracil-DNA glycosylase superfamily protein |
|---|
| Protein accession | YP_001684955 |
|---|
| Protein GI | 167647292 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.294993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCTGG ACGTCCTCCT AACCGATATC CGCGCCTGCC GGGCTTGCGC TCCGCACCTG
CCGCATACGC CAAGGCCGGT GGTGCGGGTG GGCGAGGGGA CGCGGATCCT GATCTGCGGC
CAGGCGCCCG GCCGGCTGGT CCACGAGACT GGCCTGCCGT TCAACGATCC GTCCGGAAAC
CGTCTGCGCG ACTGGATGGG GATCGACCGC GAGACCTTCT ACGGCCGTCT GGAGATCGGT
GTGGCGGCCA TGGCGTTCTG CTTTCCCGGA ACCAACCCCA AGGGCGGCGA CTATCCGCCG
CCGGCCCGCT GCGCGCTGCT TTGGCGCCAG CCGCTGCTGG CGGCCTTGCC CAAGGTGGAA
CTGACCCTGC TGGTCGGGAG CCACGCCCAA GCCTGGGCGT TGAACTCCCG CATGAAGGCG
AACATGACCG ACACCGTCGC CGCCTGGCGC GACTTCATCG ACGAGGGCGT CCTGCCCCTG
CCGCACCCGT CGTGGCGCAA CACGGGCTGG CTCAAGCGCA ACCCCTGGTT CGAGGCGGAG
GTCGCGCCCT ATCTTCGCCG CCGAGTGGCG GGCATTCTGG CGTCATGA
|
|---|
| Protein sequence | MVLDVLLTDI RACRACAPHL PHTPRPVVRV GEGTRILICG QAPGRLVHET GLPFNDPSGN
RLRDWMGIDR ETFYGRLEIG VAAMAFCFPG TNPKGGDYPP PARCALLWRQ PLLAALPKVE
LTLLVGSHAQ AWALNSRMKA NMTDTVAAWR DFIDEGVLPL PHPSWRNTGW LKRNPWFEAE
VAPYLRRRVA GILAS
|
|---|
| |